RNA–Protein interactions for RNA: ENST00000351439.9

PDE1A-201, Transcript of phosphodiesterase 1A, humanhuman

TSL 1 (best) BASIC

Gene PDE1A, Length 2,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-201ENST00000351439 CBX3Q13185 183 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 EXOC3L4Q17RC7 722 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 TCERG1LQ5VWI1 586 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 PRR5LQ6MZQ0 368 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 SFR1Q86XK3 245 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 SLF2Q8IX21 1173 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 LRRC34Q8IZ02 419 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 TPCN2Q8NHX9 752 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 ACTRT1Q8TDG2 376 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 ATXN2LQ8WWM7 1075 aaKnown RBP8.5□□□□□ -1.05
PDE1A-201ENST00000351439 RSPH1Q8WYR4 309 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 ZNF653Q96CK0 615 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 P2RX7Q99572 595 aaKnown RBP8.5□□□□□ -1.05
PDE1A-201ENST00000351439 REEP2Q9BRK0 252 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 CARD9Q9H257 536 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 IKZF4Q9H2S9 585 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 RXFP1Q9HBX9 757 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 SERPINB13Q9UIV8 391 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 TMEM98Q9Y2Y6 226 aa8.5□□□□□ -1.05
PDE1A-201ENST00000351439 USP15Q9Y4E8 981 aaPredicted RBP8.5□□□□□ -1.05
PDE1A-201ENST00000351439 EIF4E1BA6NMX2 242 aaKnown RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 BHMG1C9JSJ3 638 aaPredicted RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 C6orf229H3BNL8 230 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 KRIT1O00522 736 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 CES2O00748 559 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 RIMBP2O15034 1052 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 CLIC2O15247 247 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 DAPK3O43293 454 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 XRCC5P13010 732 aaKnown RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 SHMT1P34896 483 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 SNAP25P60880 206 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 GSTA3Q16772 222 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 KNOP1Q1ED39 458 aaKnown RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 SHROOM1Q2M3G4 852 aaPredicted RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 PRR16Q569H4 304 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 TRAPPC3LQ5T215 181 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 C10orf76Q5T2E6 689 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 PPP4R3CPQ6ZMV5 832 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 PEX26Q7Z412 305 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 CROCCP2Q86T23 111 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 HOOK3Q86VS8 718 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 LONP2Q86WA8 852 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 TBC1D16Q8TBP0 767 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 SMC6Q96SB8 1091 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 MXD3Q9BW11 206 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 CELF4Q9BZC1 486 aaKnown RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 LRRC4CQ9HCJ2 640 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 FAM114A2Q9NRY5 505 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 TMOD4Q9NZQ9 345 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 USP21Q9UK80 565 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 FBXL5Q9UKA1 691 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 TRAF3IP3Q9Y228 551 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 PCDHA1Q9Y5I3 950 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 SMCHD1A6NHR9 2005 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 DCDC2CA8MYV0 355 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 F8VZ95 297 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 PGRMC1O00264 195 aaKnown RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 TTI1O43156 1089 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 PEX11AO75192 247 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 SPATA31C1P0DKV0 1188 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 CHN1P15882 459 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 ATP2B4P23634 1241 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 MCL1Q07820 350 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 SPIRE1Q08AE8 756 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 BTG3Q14201 252 aaPredicted RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 KPNB1Q14974 876 aaKnown RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 EPHA7Q15375 998 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 QRICH1Q2TAL8 776 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 KRT71Q3SY84 523 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 WASHC2DQ5SRD0 308 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 RASIP1Q5U651 963 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 FRMD5Q7Z6J6 570 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 DAAM2Q86T65 1068 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 CCDC125Q86Z20 511 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 UBLCP1Q8WVY7 318 aaPredicted RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 DDX27Q96GQ7 796 aaKnown RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 HIC2Q96JB3 615 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 CORO1BQ9BR76 489 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 SPATA16Q9BXB7 569 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 ANO3Q9BYT9 981 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 SIX2Q9NPC8 291 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 UTP6Q9NYH9 597 aaKnown RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 NKX1-2Q9UD57 310 aaPredicted RBP8.49□□□□□ -1.05
PDE1A-201ENST00000351439 SH3GLB1Q9Y371 365 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 ASTN1O14525 1302 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 PITPNM2Q9BZ72 1349 aa8.49□□□□□ -1.05
PDE1A-201ENST00000351439 FAM196BA6NMK8 535 aa8.48□□□□□ -1.05
PDE1A-201ENST00000351439 SFI1A8K8P3 1242 aa8.48□□□□□ -1.05
PDE1A-201ENST00000351439 DDX3XO00571 662 aaKnown RBP eCLIP8.48□□□□□ -1.05
PDE1A-201ENST00000351439 GFPT2O94808 682 aa8.48□□□□□ -1.05
PDE1A-201ENST00000351439 GJB6O95452 261 aa8.48□□□□□ -1.05
PDE1A-201ENST00000351439 BCRP11274 1271 aa8.48□□□□□ -1.05
PDE1A-201ENST00000351439 VCAM1P19320 739 aa8.48□□□□□ -1.05
PDE1A-201ENST00000351439 PTDSS1P48651 473 aaKnown RBP8.48□□□□□ -1.05
PDE1A-201ENST00000351439 SCNN1DP51172 638 aa8.48□□□□□ -1.05
PDE1A-201ENST00000351439 CACNA2D1P54289 1103 aa8.48□□□□□ -1.05
PDE1A-201ENST00000351439 USP46P62068 366 aa8.48□□□□□ -1.05
PDE1A-201ENST00000351439 OCRLQ01968 901 aa8.48□□□□□ -1.05
PDE1A-201ENST00000351439 CYP4A11Q02928 519 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms