RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 PFDN6O15212 129 aa16.74■□□□□ 0.27
HDAC5-202ENST00000336057 FOXP2O15409 715 aa16.74■□□□□ 0.27
HDAC5-202ENST00000336057 ENTPD3O75355 529 aa16.74■□□□□ 0.27
HDAC5-202ENST00000336057 MKRN3Q13064 507 aaKnown RBP16.74■□□□□ 0.27
HDAC5-202ENST00000336057 STAT4Q14765 748 aa16.74■□□□□ 0.27
HDAC5-202ENST00000336057 MUM1L1Q5H9M0 696 aa16.74■□□□□ 0.27
HDAC5-202ENST00000336057 SYDE1Q6ZW31 735 aaPredicted RBP16.74■□□□□ 0.27
HDAC5-202ENST00000336057 CYFIP1Q7L576 1253 aa16.74■□□□□ 0.27
HDAC5-202ENST00000336057 WDR75Q8IWA0 830 aaKnown RBP16.74■□□□□ 0.27
HDAC5-202ENST00000336057 PARP9Q8IXQ6 854 aa16.74■□□□□ 0.27
HDAC5-202ENST00000336057 HDAC11Q96DB2 347 aa16.74■□□□□ 0.27
HDAC5-202ENST00000336057 LACRTQ9GZZ8 138 aa16.74■□□□□ 0.27
HDAC5-202ENST00000336057 PPARGC1AQ9UBK2 798 aaKnown RBP16.74■□□□□ 0.27
HDAC5-202ENST00000336057 PRLRP16471 622 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 TNFAIP2Q03169 654 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 EHD2Q9NZN4 543 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 CAPN6Q9Y6Q1 641 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 AFF2P51816 1311 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 NCF2P19878 526 aaPredicted RBP16.73■□□□□ 0.27
HDAC5-202ENST00000336057 TRIM65Q6PJ69 517 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 TRMT10CQ7L0Y3 403 aaKnown RBP16.73■□□□□ 0.27
HDAC5-202ENST00000336057 DDX42Q86XP3 938 aaKnown RBP eCLIP16.73■□□□□ 0.27
HDAC5-202ENST00000336057 ATP11CQ8NB49 1132 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 SLC30A5Q8TAD4 765 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 GRAMD1AQ96CP6 724 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 GOLPH3Q9H4A6 298 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 CYP26B1Q9NR63 512 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 KLC4Q9NSK0 619 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 FAM205AQ6ZU69 1335 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 A0A087X0T9 212 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 LMNAP02545 664 aaKnown RBP16.73■□□□□ 0.27
HDAC5-202ENST00000336057 FAM228BP0C875 321 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 ACTN3Q08043 901 aaPredicted RBP16.73■□□□□ 0.27
HDAC5-202ENST00000336057 LMBRD2Q68DH5 695 aaPredicted RBP16.73■□□□□ 0.27
HDAC5-202ENST00000336057 JAMLQ86YT9 394 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 TRAIPQ9BWF2 469 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 MRPL4Q9BYD3 311 aaKnown RBP16.73■□□□□ 0.27
HDAC5-202ENST00000336057 EPS15L1Q9UBC2 864 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 INTUQ9ULD6 942 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 CYP11B2P19099 503 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 RXRBP28702 533 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 KPNA2P52292 529 aaKnown RBP16.73■□□□□ 0.27
HDAC5-202ENST00000336057 HERVK_113P62684 666 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 SNRNP35Q16560 246 aaKnown RBP16.73■□□□□ 0.27
HDAC5-202ENST00000336057 LRGUKQ96M69 825 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 C2orf40Q9H1Z8 148 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 ETNK1Q9HBU6 452 aa16.73■□□□□ 0.27
HDAC5-202ENST00000336057 TPX2Q9ULW0 747 aaKnown RBP16.73■□□□□ 0.27
HDAC5-202ENST00000336057 AP3M2P53677 418 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 CENPPQ6IPU0 288 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 GSDMBQ8TAX9 411 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 SEMA6BQ9H3T3 888 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 ACAD9Q9H845 621 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 CHN1P15882 459 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 PHKA2P46019 1235 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 IREB2P48200 963 aaKnown RBP16.72■□□□□ 0.27
HDAC5-202ENST00000336057 FAM217BQ9NTX9 383 aaPredicted RBP16.72■□□□□ 0.27
HDAC5-202ENST00000336057 ALG6Q9Y672 507 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 H0Y3Z8 333 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 OATP04181 439 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 ITIH2P19823 946 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 ARSEP51690 589 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 STX1BP61266 288 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 SPOPLQ6IQ16 392 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 POLR3CQ9BUI4 534 aaPredicted RBP16.72■□□□□ 0.27
HDAC5-202ENST00000336057 TRIM4Q9C037 500 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 ECT2Q9H8V3 914 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 NAGPAQ9UK23 515 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 KIAA0391O15091 583 aaKnown RBP16.72■□□□□ 0.27
HDAC5-202ENST00000336057 DGAT1O75907 488 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 TAP1Q03518 808 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 TBX2Q13207 712 aaPredicted RBP16.72■□□□□ 0.27
HDAC5-202ENST00000336057 THOC5Q13769 683 aaKnown RBP16.72■□□□□ 0.27
HDAC5-202ENST00000336057 MCUQ8NE86 351 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 GJD4Q96KN9 370 aaPredicted RBP16.72■□□□□ 0.27
HDAC5-202ENST00000336057 PRMT1Q99873 361 aaKnown RBP16.72■□□□□ 0.27
HDAC5-202ENST00000336057 ERP44Q9BS26 406 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 DCTN4Q9UJW0 460 aa16.72■□□□□ 0.27
HDAC5-202ENST00000336057 HAUS5O94927 633 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 SDC4P31431 198 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 DUOXA2Q1HG44 320 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 METTL23Q86XA0 190 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 CELF4Q9BZC1 486 aaKnown RBP16.71■□□□□ 0.27
HDAC5-202ENST00000336057 M0QYV0 167 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 EARS2Q5JPH6 523 aaKnown RBP16.71■□□□□ 0.27
HDAC5-202ENST00000336057 SLC10A5Q5PT55 438 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 RSPH3Q86UC2 560 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 PPM1NQ8N819 430 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 FAM193BQ96PV7 902 aaPredicted RBP16.71■□□□□ 0.27
HDAC5-202ENST00000336057 JPH1Q9HDC5 661 aaPredicted RBP16.71■□□□□ 0.27
HDAC5-202ENST00000336057 PIM2Q9P1W9 311 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 JADE1Q6IE81 842 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 CATSPER4Q7RTX7 472 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 RIT2Q99578 217 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 SENP1Q9P0U3 644 aa16.71■□□□□ 0.27
HDAC5-202ENST00000336057 LRRIQ3A6PVS8 624 aaPredicted RBP16.71■□□□□ 0.26
HDAC5-202ENST00000336057 TCP11X1B4DZS4 312 aa16.71■□□□□ 0.26
HDAC5-202ENST00000336057 SPECC1L-ADORA2AF8WAN1 911 aa16.71■□□□□ 0.26
HDAC5-202ENST00000336057 COMTP21964 271 aa16.71■□□□□ 0.26
HDAC5-202ENST00000336057 HSP90AA5PQ58FG0 334 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms