RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 OSGEPQ9NPF4 335 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 GINM1Q9NU53 330 aa17.67■□□□□ 0.42
PACS1-201ENST00000320580 CNOT7Q9UIV1 285 aaKnown RBP17.67■□□□□ 0.42
PACS1-201ENST00000320580 BAZ2BQ9UIF8 2168 aaKnown RBP17.67■□□□□ 0.42
PACS1-201ENST00000320580 CFLARO15519 480 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 PTENP60484 403 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 KCTD21Q4G0X4 260 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 MTHFD1LQ6UB35 978 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 KLF6Q99612 283 aaPredicted RBP17.66■□□□□ 0.42
PACS1-201ENST00000320580 SYT15Q9BQS2 421 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 MEIS1O00470 390 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 PAEPP09466 180 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 AUHQ13825 339 aaKnown RBP17.66■□□□□ 0.42
PACS1-201ENST00000320580 RBM26Q5T8P6 1007 aaKnown RBP17.66■□□□□ 0.42
PACS1-201ENST00000320580 USP37Q86T82 979 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 CKAP2Q8WWK9 683 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 RSAD2Q8WXG1 361 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 MTA3Q9BTC8 594 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 KBTBD4Q9NVX7 518 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 TOM1L1O75674 476 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 CENPUQ71F23 418 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 INPP5DQ92835 1189 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 TSNARE1Q96NA8 513 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 RANBP17Q9H2T7 1088 aaKnown RBP17.66■□□□□ 0.42
PACS1-201ENST00000320580 PICK1Q9NRD5 415 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 RAB20Q9NX57 234 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 CHORDC1Q9UHD1 332 aaPredicted RBP17.66■□□□□ 0.42
PACS1-201ENST00000320580 COMMD3-BMI1R4GMX3 469 aa17.66■□□□□ 0.42
PACS1-201ENST00000320580 CLDN3O15551 220 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 LMNB2Q03252 620 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 CTTNQ14247 550 aaKnown RBP17.65■□□□□ 0.42
PACS1-201ENST00000320580 RIBC1Q8N443 379 aaPredicted RBP17.65■□□□□ 0.42
PACS1-201ENST00000320580 CTNNAL1Q9UBT7 734 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 TMCO1Q9UM00 188 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 E9PMD0 336 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 DCUN1D2Q6PH85 259 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 ZNF571Q7Z3V5 609 aaPredicted RBP17.65■□□□□ 0.42
PACS1-201ENST00000320580 PIGWQ7Z7B1 504 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 RBM15Q96T37 977 aaKnown RBP eCLIP17.65■□□□□ 0.42
PACS1-201ENST00000320580 ERVV-2B6SEH9 535 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 WFS1O76024 890 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 PSMG1O95456 288 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 ITIH2P19823 946 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 RPL21P46778 160 aaKnown RBP17.65■□□□□ 0.42
PACS1-201ENST00000320580 ITGA8P53708 1063 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 CRLF3Q8IUI8 442 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 THAP11Q96EK4 314 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 CLPTM1O96005 669 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 ALDH18A1P54886 795 aaKnown RBP17.65■□□□□ 0.42
PACS1-201ENST00000320580 MTFR1Q15390 333 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 ZBED8Q8IZ13 594 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 PPP2R3CQ969Q6 453 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 RMDN2Q96LZ7 410 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 PREBQ9HCU5 417 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 SIK3Q9Y2K2 1263 aa17.65■□□□□ 0.42
PACS1-201ENST00000320580 CCDC195A0A1B0GUA6 201 aa17.64■□□□□ 0.41
PACS1-201ENST00000320580 TJP3O95049 919 aa17.64■□□□□ 0.41
PACS1-201ENST00000320580 KRT81Q14533 505 aa17.64■□□□□ 0.41
PACS1-201ENST00000320580 ANKRD20A4Q4UJ75 823 aa17.64■□□□□ 0.41
PACS1-201ENST00000320580 CENPPQ6IPU0 288 aa17.64■□□□□ 0.41
PACS1-201ENST00000320580 EXOC3L1Q86VI1 746 aa17.64■□□□□ 0.41
PACS1-201ENST00000320580 PPWD1Q96BP3 646 aaKnown RBP17.64■□□□□ 0.41
PACS1-201ENST00000320580 TBC1D23Q9NUY8 699 aa17.64■□□□□ 0.41
PACS1-201ENST00000320580 COILP38432 576 aaPredicted RBP17.64■□□□□ 0.41
PACS1-201ENST00000320580 SLC25A41Q8N5S1 370 aa17.64■□□□□ 0.41
PACS1-201ENST00000320580 SENP1Q9P0U3 644 aa17.64■□□□□ 0.41
PACS1-201ENST00000320580 MARCOQ9UEW3 520 aaPredicted RBP17.64■□□□□ 0.41
PACS1-201ENST00000320580 FRMPD2Q68DX3 1309 aaPredicted RBP17.64■□□□□ 0.41
PACS1-201ENST00000320580 ZBED4O75132 1171 aa17.64■□□□□ 0.41
PACS1-201ENST00000320580 GGPS1O95749 300 aa17.64■□□□□ 0.41
PACS1-201ENST00000320580 PCP11498 1178 aaKnown RBP17.64■□□□□ 0.41
PACS1-201ENST00000320580 PICALMQ13492 652 aa17.64■□□□□ 0.41
PACS1-201ENST00000320580 NAP1L4Q99733 375 aaKnown RBP17.64■□□□□ 0.41
PACS1-201ENST00000320580 MCF2LO15068 1137 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 MIIPQ5JXC2 388 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 MARK2Q7KZI7 788 aaKnown RBP17.63■□□□□ 0.41
PACS1-201ENST00000320580 SCFD2Q8WU76 684 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 OSBPL8Q9BZF1 889 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 NKX1-2Q9UD57 310 aaPredicted RBP17.63■□□□□ 0.41
PACS1-201ENST00000320580 KIF20BQ96Q89 1820 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 TPBGLP0DKB5 382 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 SERPINB8P50452 374 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 PSMC1P62191 440 aaKnown RBP17.63■□□□□ 0.41
PACS1-201ENST00000320580 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.63■□□□□ 0.41
PACS1-201ENST00000320580 SESTD1Q86VW0 696 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 NAALADL1Q9UQQ1 740 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 SUGT1Q9Y2Z0 365 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 RNF43Q68DV7 783 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 GJB7Q6PEY0 223 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.63■□□□□ 0.41
PACS1-201ENST00000320580 COA7Q96BR5 231 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 NR1H4Q96RI1 486 aaPredicted RBP17.63■□□□□ 0.41
PACS1-201ENST00000320580 BTBD10Q9BSF8 475 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 ARHGEF3Q9NR81 526 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 LPXNO60711 386 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 SOX5P35711 763 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 PARP6Q2NL67 630 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 ATG16L1Q676U5 607 aa17.63■□□□□ 0.41
PACS1-201ENST00000320580 CC2D2BQ6DHV5 1058 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms