RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 BRD8Q9H0E9 1235 aa15.65■□□□□ 0.1
SEC16A-202ENST00000290037 PUS7LQ9H0K6 701 aaKnown RBP15.65■□□□□ 0.1
SEC16A-202ENST00000290037 SNX2O60749 519 aa15.65■□□□□ 0.1
SEC16A-202ENST00000290037 MRPS35P82673 323 aaKnown RBP15.65■□□□□ 0.1
SEC16A-202ENST00000290037 ABCB6Q9NP58 842 aa15.65■□□□□ 0.1
SEC16A-202ENST00000290037 PTPN22Q9Y2R2 807 aa15.65■□□□□ 0.1
SEC16A-202ENST00000290037 HAUS5O94927 633 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 ITKQ08881 620 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 ITIH4Q14624 930 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 PSMD6Q15008 389 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 PCBP1Q15365 356 aaKnown RBP eCLIP15.64■□□□□ 0.09
SEC16A-202ENST00000290037 RSAD1Q9HA92 442 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 PSMC3IPQ9P2W1 217 aaPredicted RBP15.64■□□□□ 0.09
SEC16A-202ENST00000290037 PCDHB6Q9Y5E3 794 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 RASSF10A6NK89 507 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 NCAPG2Q86XI2 1143 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 NUP85Q9BW27 656 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 ACAD9Q9H845 621 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 RECQLP46063 649 aaPredicted RBP15.64■□□□□ 0.09
SEC16A-202ENST00000290037 DHX40Q8IX18 779 aaKnown RBP15.64■□□□□ 0.09
SEC16A-202ENST00000290037 FAF2Q96CS3 445 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 HGSO14964 777 aaPredicted RBP15.64■□□□□ 0.09
SEC16A-202ENST00000290037 CAPN15O75808 1086 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 HOXB8P17481 243 aaPredicted RBP15.64■□□□□ 0.09
SEC16A-202ENST00000290037 ACBD5Q5T8D3 534 aaPredicted RBP15.64■□□□□ 0.09
SEC16A-202ENST00000290037 SENP7Q9BQF6 1050 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 DCP1AQ9NPI6 582 aaPredicted RBP15.64■□□□□ 0.09
SEC16A-202ENST00000290037 CEP55Q53EZ4 464 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 APEX2Q9UBZ4 518 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 TTLL3Q9Y4R7 772 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 PCDHA10Q9Y5I2 948 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 ATP6V1E1P36543 226 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 SERPINB12Q96P63 405 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 LMO7Q8WWI1 1683 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 EIF3HO15372 352 aaKnown RBP eCLIP15.64■□□□□ 0.097e-8■■■■□ 24.6
SEC16A-202ENST00000290037 NAB2Q15742 525 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 NUGGCQ68CJ6 796 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 NYAP2Q9P242 653 aa15.64■□□□□ 0.09
SEC16A-202ENST00000290037 CAPRIN2Q6IMN6 1127 aaKnown RBP15.63■□□□□ 0.09
SEC16A-202ENST00000290037 APOL1O14791 398 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 TRIM68Q6AZZ1 485 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 SAMSN1Q9NSI8 373 aaKnown RBP15.63■□□□□ 0.09
SEC16A-202ENST00000290037 PCDHA6Q9UN73 950 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 PCDHA8Q9Y5H6 950 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 OCRLQ01968 901 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 SF3B3Q15393 1217 aaKnown RBP15.63■□□□□ 0.09
SEC16A-202ENST00000290037 GADL1Q6ZQY3 521 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 FAM124BQ9H5Z6 455 aaPredicted RBP15.63■□□□□ 0.09
SEC16A-202ENST00000290037 SLCO1B7G3V0H7 640 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 AARSP49588 968 aaKnown RBP eCLIP15.63■□□□□ 0.09
SEC16A-202ENST00000290037 NMRK1Q9NWW6 199 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 CHCHD3Q9NX63 227 aaKnown RBP15.63■□□□□ 0.09
SEC16A-202ENST00000290037 MOCS3O95396 460 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 LSM8O95777 96 aaKnown RBP15.63■□□□□ 0.09
SEC16A-202ENST00000290037 C4BPBP20851 252 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 CIAPIN1Q6FI81 312 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 PALB2Q86YC2 1186 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 SIRT2Q8IXJ6 389 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 STAG2Q8N3U4 1231 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 CEMIPQ8WUJ3 1361 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 APOA1P02647 267 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 NNMTP40261 264 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 PATL1Q86TB9 770 aaKnown RBP15.63■□□□□ 0.09
SEC16A-202ENST00000290037 TRIM69Q86WT6 500 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 PAK5Q9P286 719 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 NCAM2O15394 837 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 GZMAP12544 262 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 CEP95Q96GE4 821 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 HEXIM2Q96MH2 286 aaKnown RBP15.63■□□□□ 0.09
SEC16A-202ENST00000290037 TRIM9Q9C026 710 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 BHMT2Q9H2M3 363 aa15.63■□□□□ 0.09
SEC16A-202ENST00000290037 ARHGEF9O43307 516 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 TSPAN18Q96SJ8 248 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 EFTUD2Q15029 972 aaKnown RBP eCLIP15.62■□□□□ 0.091e-6■■■□□ 18.7
SEC16A-202ENST00000290037 SGSM1Q2NKQ1 1148 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 BSPRYQ5W0U4 402 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.62■□□□□ 0.09
SEC16A-202ENST00000290037 APBA3O96018 575 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 STRIP1Q5VSL9 837 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 TRIM67Q6ZTA4 783 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 TMEM47Q9BQJ4 181 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 ZNF302Q9NR11 478 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 NAB1Q13506 487 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 NR1I3Q14994 352 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 TGS1Q96RS0 853 aaKnown RBP15.62■□□□□ 0.09
SEC16A-202ENST00000290037 SLC26A2P50443 739 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 TBC1D1Q86TI0 1168 aaPredicted RBP15.62■□□□□ 0.09
SEC16A-202ENST00000290037 RMDN3Q96TC7 470 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 SH3GL3Q99963 347 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 MEFVO15553 781 aaPredicted RBP15.62■□□□□ 0.09
SEC16A-202ENST00000290037 ZNF827Q17R98 1081 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 CCNYQ8ND76 341 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 ARHGEF26Q96DR7 871 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 WHRNQ9P202 907 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 SLC9A2Q9UBY0 812 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 ADAMTS1Q9UHI8 967 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 LRRC53A6NM62 1247 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 XKR3Q5GH77 459 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 TRIML2Q8N7C3 387 aa15.62■□□□□ 0.09
SEC16A-202ENST00000290037 SPATA4Q8NEY3 305 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms