RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W YLR446WQ06204 433 aa2.1□□□□□ -2.07
UBP16YPL072W MCT1Q12283 360 aa2.1□□□□□ -2.07
UBP16YPL072W RAX2Q12465 1220 aa2.1□□□□□ -2.07
UBP16YPL072W EPT1P22140 391 aa2.09□□□□□ -2.07
UBP16YPL072W ZIP1P31111 875 aa2.09□□□□□ -2.07
UBP16YPL072W ARO4P32449 370 aaKnown RBP2.09□□□□□ -2.07
UBP16YPL072W KRE6P32486 720 aa2.09□□□□□ -2.07
UBP16YPL072W CDC13P32797 924 aaKnown RBP2.09□□□□□ -2.07
UBP16YPL072W MRPL6P32904 214 aa2.09□□□□□ -2.07
UBP16YPL072W YKL187CP34231 750 aa2.09□□□□□ -2.07
UBP16YPL072W PRS4P38063 326 aaPredicted RBP2.09□□□□□ -2.07
UBP16YPL072W SHE1P38200 338 aa2.09□□□□□ -2.07
UBP16YPL072W BIG1P38813 335 aa2.09□□□□□ -2.07
UBP16YPL072W PET8P38921 284 aa2.09□□□□□ -2.07
UBP16YPL072W GGC1P38988 300 aa2.09□□□□□ -2.07
UBP16YPL072W YER085CP40058 173 aa2.09□□□□□ -2.07
UBP16YPL072W RTR1P40084 226 aaPredicted RBP2.09□□□□□ -2.07
UBP16YPL072W YFL012WP43580 148 aa2.09□□□□□ -2.07
UBP16YPL072W YPT32P51996 222 aaKnown RBP2.09□□□□□ -2.07
UBP16YPL072W VEL1P53058 206 aa2.09□□□□□ -2.07
UBP16YPL072W PEX31P53203 462 aa2.09□□□□□ -2.07
UBP16YPL072W RPL21AQ02753 160 aaKnown RBP2.09□□□□□ -2.07
UBP16YPL072W TAF9Q05027 157 aa2.09□□□□□ -2.07
UBP16YPL072W SFH1Q06168 426 aa2.09□□□□□ -2.07
UBP16YPL072W PEX30Q06169 523 aa2.09□□□□□ -2.07
UBP16YPL072W SDO1Q07953 250 aaKnown RBP2.09□□□□□ -2.07
UBP16YPL072W YOR029WQ12243 111 aa2.09□□□□□ -2.07
UBP16YPL072W RPB4P20433 221 aaPredicted RBP2.08□□□□□ -2.08
UBP16YPL072W VPS3P23643 1011 aa2.08□□□□□ -2.08
UBP16YPL072W SPS19P32573 292 aaKnown RBP2.08□□□□□ -2.08
UBP16YPL072W RCK1P38622 512 aa2.08□□□□□ -2.08
UBP16YPL072W RPL10P41805 221 aaKnown RBP2.08□□□□□ -2.08
UBP16YPL072W ASG7P46993 209 aa2.08□□□□□ -2.08
UBP16YPL072W YJR012CP47087 207 aa2.08□□□□□ -2.08
UBP16YPL072W SDS23P53172 527 aa2.08□□□□□ -2.08
UBP16YPL072W CGR1P53188 120 aa2.08□□□□□ -2.08
UBP16YPL072W YNR066CP53752 436 aa2.08□□□□□ -2.08
UBP16YPL072W TAZ1Q06510 381 aa2.08□□□□□ -2.08
UBP16YPL072W RNA15P25299 296 aaPredicted RBP2.07□□□□□ -2.08
UBP16YPL072W POF1P25576 258 aa2.07□□□□□ -2.08
UBP16YPL072W TPS2P31688 896 aaKnown RBP2.07□□□□□ -2.08
UBP16YPL072W FMT1P32785 401 aa2.07□□□□□ -2.08
UBP16YPL072W RFT1P38206 574 aaPredicted RBP2.07□□□□□ -2.08
UBP16YPL072W PRS2P38620 318 aaKnown RBP2.07□□□□□ -2.08
UBP16YPL072W NPT1P39683 429 aaKnown RBP2.07□□□□□ -2.08
UBP16YPL072W YIL054WP40524 105 aa2.07□□□□□ -2.08
UBP16YPL072W PFS2P42841 465 aaKnown RBP2.07□□□□□ -2.08
UBP16YPL072W TPC1P53257 314 aa2.07□□□□□ -2.08
UBP16YPL072W TRM44Q02648 567 aaKnown RBP2.07□□□□□ -2.08
UBP16YPL072W RMI1Q02685 241 aa2.07□□□□□ -2.08
UBP16YPL072W SCS7Q03529 384 aa2.07□□□□□ -2.08
UBP16YPL072W INP2Q03824 705 aa2.07□□□□□ -2.08
UBP16YPL072W KRE28Q04431 385 aa2.07□□□□□ -2.08
UBP16YPL072W SEC13Q04491 297 aaKnown RBP2.07□□□□□ -2.08
UBP16YPL072W ARC18Q05933 178 aaKnown RBP2.07□□□□□ -2.08
UBP16YPL072W SEC10Q06245 871 aa2.07□□□□□ -2.08
UBP16YPL072W ATG31Q12421 196 aa2.07□□□□□ -2.08
UBP16YPL072W YMR316C-AI2HB70 103 aa2.07□□□□□ -2.08
UBP16YPL072W PPA2P28239 310 aa2.07□□□□□ -2.08
UBP16YPL072W PEX3P28795 441 aa2.07□□□□□ -2.08
UBP16YPL072W YKT6P36015 200 aaKnown RBP2.07□□□□□ -2.08
UBP16YPL072W ECM34P38728 170 aa2.07□□□□□ -2.08
UBP16YPL072W KRE29P40026 464 aa2.07□□□□□ -2.08
UBP16YPL072W FMP48P53233 369 aa2.07□□□□□ -2.08
UBP16YPL072W YML018CQ03730 393 aa2.07□□□□□ -2.08
UBP16YPL072W UTP15Q04305 513 aaKnown RBP2.07□□□□□ -2.08
UBP16YPL072W API2Q04413 109 aa2.07□□□□□ -2.08
UBP16YPL072W MYO5Q04439 1219 aaKnown RBP2.07□□□□□ -2.08
UBP16YPL072W YLR283WQ05867 314 aa2.07□□□□□ -2.08
UBP16YPL072W YOR292CQ08743 309 aa2.07□□□□□ -2.08
UBP16YPL072W YOR376WQ08900 122 aa2.07□□□□□ -2.08
UBP16YPL072W YPL278CQ08990 100 aa2.07□□□□□ -2.08
UBP16YPL072W MSH5Q12175 901 aa2.07□□□□□ -2.08
UBP16YPL072W RFM1Q12192 310 aa2.07□□□□□ -2.08
UBP16YPL072W YOR114WQ12219 294 aa2.07□□□□□ -2.08
UBP16YPL072W YOS9Q99220 542 aa2.07□□□□□ -2.08
UBP16YPL072W RPS3P05750 240 aaKnown RBP2.06□□□□□ -2.08
UBP16YPL072W DAL81P21657 970 aa2.06□□□□□ -2.08
UBP16YPL072W RPL24BP24000 155 aaKnown RBP2.06□□□□□ -2.08
UBP16YPL072W IMP1P28627 190 aa2.06□□□□□ -2.08
UBP16YPL072W CAM1P29547 415 aaKnown RBP2.06□□□□□ -2.08
UBP16YPL072W AEP1P32493 518 aa2.06□□□□□ -2.08
UBP16YPL072W ALK2P32789 676 aaPredicted RBP2.06□□□□□ -2.08
UBP16YPL072W AIM29P36154 155 aa2.06□□□□□ -2.08
UBP16YPL072W VAB2P40003 282 aa2.06□□□□□ -2.08
UBP16YPL072W PRP24P49960 444 aaKnown RBP2.06□□□□□ -2.08
UBP16YPL072W MNT4P53745 580 aa2.06□□□□□ -2.08
UBP16YPL072W PGA2P53903 129 aa2.06□□□□□ -2.08
UBP16YPL072W ASI3P53983 676 aa2.06□□□□□ -2.08
UBP16YPL072W VPS60Q03390 229 aa2.06□□□□□ -2.08
UBP16YPL072W INP1Q03694 420 aa2.06□□□□□ -2.08
UBP16YPL072W GTO3Q04806 366 aa2.06□□□□□ -2.08
UBP16YPL072W MIM1Q08176 113 aa2.06□□□□□ -2.08
UBP16YPL072W SME1Q12330 94 aaPredicted RBP2.06□□□□□ -2.08
UBP16YPL072W STH1P32597 1359 aa2.05□□□□□ -2.08
UBP16YPL072W YAL064W-BO13512 126 aa2.05□□□□□ -2.08
UBP16YPL072W TDH2P00358 332 aaKnown RBP2.05□□□□□ -2.08
UBP16YPL072W TPI1P00942 248 aaKnown RBP2.05□□□□□ -2.08
UBP16YPL072W DOA4P32571 926 aa2.05□□□□□ -2.08
UBP16YPL072W GPX1P36014 167 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms