RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	YTH1	Q06102	208 aa	Predicted RBP	3.63	□□□□□ -1.83
SNL1	YIL016W	MMT2	Q08970	484 aa		3.63	□□□□□ -1.83
SNL1	YIL016W	RPS3	P05750	240 aa	Known RBP	3.62	□□□□□ -1.83
SNL1	YIL016W	CDC36	P06100	191 aa	Predicted RBP	3.62	□□□□□ -1.83
SNL1	YIL016W	PET494	P07390	489 aa	Predicted RBP	3.62	□□□□□ -1.83
SNL1	YIL016W	ZIP1	P31111	875 aa		3.62	□□□□□ -1.83
SNL1	YIL016W	OTU1	P43558	301 aa		3.62	□□□□□ -1.83
SNL1	YIL016W	VEL1	P53058	206 aa		3.62	□□□□□ -1.83
SNL1	YIL016W	MAL13	P53338	473 aa		3.62	□□□□□ -1.83
SNL1	YIL016W	TLG1	Q03322	224 aa		3.62	□□□□□ -1.83
SNL1	YIL016W	YLR283W	Q05867	314 aa		3.62	□□□□□ -1.83
SNL1	YIL016W	TLG2	Q08144	397 aa		3.62	□□□□□ -1.83
SNL1	YIL016W	YPL278C	Q08990	100 aa		3.62	□□□□□ -1.83
SNL1	YIL016W	SNF8	Q12483	233 aa		3.62	□□□□□ -1.83
SNL1	YIL016W	DAL81	P21657	970 aa		3.61	□□□□□ -1.83
SNL1	YIL016W	VPS3	P23643	1011 aa		3.61	□□□□□ -1.83
SNL1	YIL016W	QRI5	P32344	111 aa		3.61	□□□□□ -1.83
SNL1	YIL016W	AEP1	P32493	518 aa		3.61	□□□□□ -1.83
SNL1	YIL016W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.61	□□□□□ -1.83	not detected
SNL1	YIL016W	PGA2	P53903	129 aa		3.61	□□□□□ -1.83
SNL1	YIL016W	RNY1	Q02933	434 aa	Known RBP	3.61	□□□□□ -1.83
SNL1	YIL016W	INP1	Q03694	420 aa		3.61	□□□□□ -1.83
SNL1	YIL016W	ASP3-2	P0CX77	362 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	ASP3-3	P0CX78	362 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	ASP3-4	P0CX79	362 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	ASP3-1	P0CZ17	362 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	TCP1	P12612	559 aa	Known RBP	3.6	□□□□□ -1.83
SNL1	YIL016W	PPA2	P28239	310 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	YKL187C	P34231	750 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	RFT1	P38206	574 aa	Predicted RBP	3.6	□□□□□ -1.83
SNL1	YIL016W	GPI18	P38211	433 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	GGC1	P38988	300 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	YER184C	P39961	794 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	SNM1	P40993	198 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	GLG2	P47011	380 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	IBA57	P47158	497 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	YNL095C	P53932	642 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	YML018C	Q03730	393 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	YMR244W	Q04018	355 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	SEC13	Q04491	297 aa	Known RBP	3.6	□□□□□ -1.83
SNL1	YIL016W	GTO3	Q04806	366 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	VIK1	Q12045	647 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	ADF1	Q2V2Q1	113 aa		3.6	□□□□□ -1.83
SNL1	YIL016W	ISY1	P21374	235 aa	Predicted RBP	3.59	□□□□□ -1.83
SNL1	YIL016W	AIM29	P36154	155 aa		3.59	□□□□□ -1.83
SNL1	YIL016W	FRM2	P37261	193 aa		3.59	□□□□□ -1.83
SNL1	YIL016W	SMP1	P38128	452 aa		3.59	□□□□□ -1.83
SNL1	YIL016W	MRX3	P38172	270 aa		3.59	□□□□□ -1.83
SNL1	YIL016W	AVT7	P40501	490 aa		3.59	□□□□□ -1.83
SNL1	YIL016W	SER33	P40510	469 aa		3.59	□□□□□ -1.83
SNL1	YIL016W	CGR1	P53188	120 aa		3.59	□□□□□ -1.83
SNL1	YIL016W	TRM44	Q02648	567 aa	Known RBP	3.59	□□□□□ -1.83
SNL1	YIL016W	VPS60	Q03390	229 aa		3.59	□□□□□ -1.83
SNL1	YIL016W	SEC10	Q06245	871 aa		3.59	□□□□□ -1.83
SNL1	YIL016W	SME1	Q12330	94 aa	Predicted RBP	3.59	□□□□□ -1.83
SNL1	YIL016W	FOL3	Q12676	427 aa	Predicted RBP	3.59	□□□□□ -1.83
SNL1	YIL016W	COX4	P04037	155 aa		3.58	□□□□□ -1.84
SNL1	YIL016W	RHO1	P06780	209 aa	Known RBP	3.58	□□□□□ -1.84
SNL1	YIL016W	RNA15	P25299	296 aa	Predicted RBP	3.58	□□□□□ -1.84
SNL1	YIL016W	YCR025C	P25352	136 aa		3.58	□□□□□ -1.84
SNL1	YIL016W	RPS5	P26783	225 aa	Known RBP	3.58	□□□□□ -1.84
SNL1	YIL016W	JEN1	P36035	616 aa		3.58	□□□□□ -1.84
SNL1	YIL016W	MRP21	P38175	177 aa		3.58	□□□□□ -1.84
SNL1	YIL016W	SHE3	P38272	425 aa	Known RBP	3.58	□□□□□ -1.84
SNL1	YIL016W	MBA1	P38300	278 aa		3.58	□□□□□ -1.84
SNL1	YIL016W	SMB1	P40018	196 aa	Known RBP	3.58	□□□□□ -1.84
SNL1	YIL016W	API2	Q04413	109 aa		3.58	□□□□□ -1.84
SNL1	YIL016W	KRE28	Q04431	385 aa		3.58	□□□□□ -1.84
SNL1	YIL016W	PAL1	Q05518	499 aa	Known RBP	3.58	□□□□□ -1.84
SNL1	YIL016W	YOL029C	Q08187	201 aa		3.58	□□□□□ -1.84
SNL1	YIL016W	YPL119C-A	Q3E751	87 aa		3.58	□□□□□ -1.84
SNL1	YIL016W	NHP6B	P11633	99 aa	Known RBP	3.57	□□□□□ -1.84
SNL1	YIL016W	EPT1	P22140	391 aa		3.57	□□□□□ -1.84
SNL1	YIL016W	RPL24B	P24000	155 aa	Known RBP	3.57	□□□□□ -1.84
SNL1	YIL016W	IMP1	P28627	190 aa		3.57	□□□□□ -1.84
SNL1	YIL016W	EFM1	P38732	585 aa		3.57	□□□□□ -1.84
SNL1	YIL016W	SHC1	P39000	512 aa		3.57	□□□□□ -1.84
SNL1	YIL016W	SEN34	P39707	275 aa		3.57	□□□□□ -1.84
SNL1	YIL016W	ALD5	P40047	520 aa	Known RBP	3.57	□□□□□ -1.84
SNL1	YIL016W	YIL012W	P40551	113 aa		3.57	□□□□□ -1.84
SNL1	YIL016W	HOC1	P47124	396 aa		3.57	□□□□□ -1.84
SNL1	YIL016W	PGU1	P47180	361 aa		3.57	□□□□□ -1.84
SNL1	YIL016W	COG7	P53195	279 aa		3.57	□□□□□ -1.84
SNL1	YIL016W	LOA1	Q06508	300 aa		3.57	□□□□□ -1.84
SNL1	YIL016W	YDR018C	Q12185	396 aa		3.57	□□□□□ -1.84
SNL1	YIL016W	RAX2	Q12465	1220 aa		3.57	□□□□□ -1.84
SNL1	YIL016W	YAL064W-B	O13512	126 aa		3.56	□□□□□ -1.84
SNL1	YIL016W	THP2	O13539	261 aa	Known RBP	3.56	□□□□□ -1.84
SNL1	YIL016W	COQ1	P18900	473 aa		3.56	□□□□□ -1.84
SNL1	YIL016W	PBN1	P25580	416 aa		3.56	□□□□□ -1.84
SNL1	YIL016W	ATG15	P25641	520 aa		3.56	□□□□□ -1.84
SNL1	YIL016W	TPS2	P31688	896 aa	Known RBP	3.56	□□□□□ -1.84
SNL1	YIL016W	YEL045C	P32616	141 aa		3.56	□□□□□ -1.84
SNL1	YIL016W	ALK2	P32789	676 aa	Predicted RBP	3.56	□□□□□ -1.84
SNL1	YIL016W	ZRT3	P34240	503 aa		3.56	□□□□□ -1.84
SNL1	YIL016W	MIC12	P38341	106 aa		3.56	□□□□□ -1.84
SNL1	YIL016W	SIP3	P38717	1229 aa		3.56	□□□□□ -1.84
SNL1	YIL016W	KRE29	P40026	464 aa		3.56	□□□□□ -1.84
SNL1	YIL016W	NBP35	P52920	328 aa		3.56	□□□□□ -1.84
SNL1	YIL016W	YGL262W	P53054	175 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms