RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C ENT5Q03769 411 aaKnown RBP1.18□□□□□ -2.22
VPS54YDR027C YET2Q04210 160 aa1.18□□□□□ -2.22
VPS54YDR027C FSH2Q05015 223 aa1.18□□□□□ -2.22
VPS54YDR027C LIP2Q06005 328 aa1.18□□□□□ -2.22
VPS54YDR027C YOL024WQ08172 172 aa1.18□□□□□ -2.22
VPS54YDR027C SAM4Q08985 325 aaKnown RBP1.18□□□□□ -2.22
VPS54YDR027C TAF10Q12030 206 aa1.18□□□□□ -2.22
VPS54YDR027C YIL002W-AQ3E7Z5 69 aa1.18□□□□□ -2.22
VPS54YDR027C REP1P03871 373 aa1.17□□□□□ -2.22
VPS54YDR027C RAD7P06779 565 aa1.17□□□□□ -2.22
VPS54YDR027C UNG1P12887 359 aa1.17□□□□□ -2.22
VPS54YDR027C SAR1P20606 190 aaKnown RBP1.17□□□□□ -2.22
VPS54YDR027C GIT1P25346 518 aa1.17□□□□□ -2.22
VPS54YDR027C RPC25P35718 212 aa1.17□□□□□ -2.22
VPS54YDR027C WSC4P38739 605 aa1.17□□□□□ -2.22
VPS54YDR027C VPS45P38932 577 aa1.17□□□□□ -2.22
VPS54YDR027C MOB2P43563 287 aa1.17□□□□□ -2.22
VPS54YDR027C AIM23P47015 356 aa1.17□□□□□ -2.22
VPS54YDR027C GTO1P48239 356 aa1.17□□□□□ -2.22
VPS54YDR027C SEH1P53011 349 aaKnown RBP1.17□□□□□ -2.22
VPS54YDR027C CDH1P53197 566 aa1.17□□□□□ -2.22
VPS54YDR027C TPC1P53257 314 aa1.17□□□□□ -2.22
VPS54YDR027C NRM1P53718 249 aa1.17□□□□□ -2.22
VPS54YDR027C PBP4Q07362 185 aaKnown RBP1.17□□□□□ -2.22
VPS54YDR027C APC9Q12107 265 aa1.17□□□□□ -2.22
VPS54YDR027C SFM1Q12314 213 aa1.17□□□□□ -2.22
VPS54YDR027C HMS1Q12398 434 aa1.17□□□□□ -2.22
VPS54YDR027C PRP46Q12417 451 aaPredicted RBP1.17□□□□□ -2.22
VPS54YDR027C TDH1P00360 332 aaKnown RBP1.17□□□□□ -2.22
VPS54YDR027C CSM1P25651 190 aa1.17□□□□□ -2.22
VPS54YDR027C ACB1P31787 87 aa1.17□□□□□ -2.22
VPS54YDR027C CHL4P38907 458 aa1.17□□□□□ -2.22
VPS54YDR027C FHL1P39521 936 aa1.17□□□□□ -2.22
VPS54YDR027C SEO1P39709 593 aa1.17□□□□□ -2.22
VPS54YDR027C PEX22P39718 180 aa1.17□□□□□ -2.22
VPS54YDR027C PMT4P46971 762 aa1.17□□□□□ -2.22
VPS54YDR027C YJR054WP47114 497 aa1.17□□□□□ -2.22
VPS54YDR027C PGU1P47180 361 aa1.17□□□□□ -2.22
VPS54YDR027C YNL260CP53846 198 aa1.17□□□□□ -2.22
VPS54YDR027C CSI1Q04368 295 aa1.17□□□□□ -2.22
VPS54YDR027C YLR177WQ06251 628 aa1.17□□□□□ -2.22
VPS54YDR027C DAL82P21705 255 aa1.16□□□□□ -2.22
VPS54YDR027C PEX34P25584 144 aa1.16□□□□□ -2.22
VPS54YDR027C ATG15P25641 520 aa1.16□□□□□ -2.22
VPS54YDR027C MEI5P32489 222 aa1.16□□□□□ -2.22
VPS54YDR027C ZRT1P32804 376 aa1.16□□□□□ -2.22
VPS54YDR027C PDC2P32896 925 aa1.16□□□□□ -2.22
VPS54YDR027C RPT5P33297 434 aaKnown RBP1.16□□□□□ -2.22
VPS54YDR027C SRX1P36077 127 aa1.16□□□□□ -2.22
VPS54YDR027C MRPL37P36532 105 aa1.16□□□□□ -2.22
VPS54YDR027C SHE1P38200 338 aa1.16□□□□□ -2.22
VPS54YDR027C OM14P38325 134 aa1.16□□□□□ -2.22
VPS54YDR027C LSM12P38828 187 aaKnown RBP1.16□□□□□ -2.22
VPS54YDR027C PEX18P38855 283 aa1.16□□□□□ -2.22
VPS54YDR027C SCC4P40090 624 aa1.16□□□□□ -2.22
VPS54YDR027C FMP33P46998 180 aa1.16□□□□□ -2.22
VPS54YDR027C CWC22P53333 577 aaKnown RBP1.16□□□□□ -2.22
VPS54YDR027C HCH1P53834 153 aa1.16□□□□□ -2.22
VPS54YDR027C APC4Q04601 652 aa1.16□□□□□ -2.22
VPS54YDR027C RRT8Q08219 342 aa1.16□□□□□ -2.22
VPS54YDR027C RDL2Q08742 149 aaKnown RBP1.16□□□□□ -2.22
VPS54YDR027C SLF1Q12034 447 aaKnown RBP1.16□□□□□ -2.22
VPS54YDR027C LDB17Q12342 491 aa1.16□□□□□ -2.22
VPS54YDR027C PRM7Q12459 698 aa1.16□□□□□ -2.22
VPS54YDR027C SSA3P09435 649 aaKnown RBP1.16□□□□□ -2.22
VPS54YDR027C FRS2P15625 503 aaKnown RBP1.16□□□□□ -2.22
VPS54YDR027C CDC50P25656 391 aa1.16□□□□□ -2.22
VPS54YDR027C PRR1P28708 518 aa1.16□□□□□ -2.22
VPS54YDR027C ITR2P30606 609 aa1.16□□□□□ -2.22
VPS54YDR027C TPO5P36029 618 aa1.16□□□□□ -2.22
VPS54YDR027C SWD2P36104 329 aaPredicted RBP1.16□□□□□ -2.22
VPS54YDR027C YPC1P38298 316 aa1.16□□□□□ -2.22
VPS54YDR027C YMR262WP38430 313 aa1.16□□□□□ -2.22
VPS54YDR027C YHL026CP38740 315 aa1.16□□□□□ -2.22
VPS54YDR027C MED6P38782 295 aa1.16□□□□□ -2.22
VPS54YDR027C PET8P38921 284 aa1.16□□□□□ -2.22
VPS54YDR027C YGR015CP53208 328 aa1.16□□□□□ -2.22
VPS54YDR027C YDR115WQ04598 105 aa1.16□□□□□ -2.22
VPS54YDR027C GAS2Q06135 555 aa1.16□□□□□ -2.22
VPS54YDR027C KAP95Q06142 861 aaKnown RBP1.16□□□□□ -2.22
VPS54YDR027C YLL007CQ07799 665 aa1.16□□□□□ -2.22
VPS54YDR027C YLR012CQ07927 99 aa1.16□□□□□ -2.22
VPS54YDR027C SIA1Q12212 622 aa1.16□□□□□ -2.22
VPS54YDR027C ZRC1P20107 442 aa1.15□□□□□ -2.22
VPS54YDR027C LDS1P31379 325 aa1.15□□□□□ -2.22
VPS54YDR027C YBR241CP38142 488 aa1.15□□□□□ -2.22
VPS54YDR027C YBR062CP38239 180 aa1.15□□□□□ -2.22
VPS54YDR027C RCK1P38622 512 aa1.15□□□□□ -2.22
VPS54YDR027C CTM1P38818 585 aa1.15□□□□□ -2.22
VPS54YDR027C GDS1P41913 522 aa1.15□□□□□ -2.22
VPS54YDR027C IGD1P43598 195 aa1.15□□□□□ -2.22
VPS54YDR027C COX16P47081 118 aa1.15□□□□□ -2.22
VPS54YDR027C RNH201P53942 307 aa1.15□□□□□ -2.22
VPS54YDR027C SLT2Q00772 484 aa1.15□□□□□ -2.22
VPS54YDR027C SNX41Q04053 625 aa1.15□□□□□ -2.22
VPS54YDR027C FAR10Q06001 478 aa1.15□□□□□ -2.22
VPS54YDR027C MIM1Q08176 113 aa1.15□□□□□ -2.22
VPS54YDR027C MMT2Q08970 484 aa1.15□□□□□ -2.22
VPS54YDR027C URA2P07259 2214 aaKnown RBP1.15□□□□□ -2.22
VPS54YDR027C MLP1Q02455 1875 aaKnown RBP1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms