RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 CDC42EP1Q00587 391 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 SATB1Q01826 763 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 CREMQ03060 361 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 ZNF252P-AS1Q0IIN9 211 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 TROAPQ12815 778 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 SART3Q15020 963 aaKnown RBP12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 RNF43Q68DV7 783 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 CYB5R4Q7L1T6 521 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 RILPL2Q969X0 211 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 SPZ1Q9BXG8 430 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 INO80BQ9C086 356 aaPredicted RBP12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 LY9Q9HBG7 655 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 ANKFY1Q9P2R3 1169 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 MAFBQ9Y5Q3 323 aaPredicted RBP12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 PATJQ8NI35 1801 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 DMXL2Q8TDJ6 3036 aa12.43□□□□□ -0.42
PTP4A1-207ENST00000639568 ECI2O75521 394 aa12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 HNRNPA1P09651 372 aaKnown RBP eCLIP12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 PPM1LQ5SGD2 360 aa12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 LILRA6Q6PI73 481 aa12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 CTCFLQ8NI51 663 aaPredicted RBP12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 ITFG1Q8TB96 612 aa12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 FAM3CQ92520 227 aa12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 DNASE1L2Q92874 299 aa12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 GATA6Q92908 595 aa12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 FAM167AQ96KS9 214 aa12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 SCNM1Q9BWG6 230 aa12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 TMEM121BQ9BXQ6 578 aaPredicted RBP12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 RSAD1Q9HA92 442 aa12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 PCDHB2Q9Y5E7 798 aa12.42□□□□□ -0.42
PTP4A1-207ENST00000639568 BPTFQ12830 3046 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 PSAPP07602 524 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 USP41Q3LFD5 358 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 SOWAHCQ53LP3 525 aaPredicted RBP12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 CATSPER4Q7RTX7 472 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 SPEM1Q8N4L4 309 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 LINC01465Q8N7H1 131 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 LOXL4Q96JB6 756 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 LZTS2Q9BRK4 669 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 BRD9Q9H8M2 597 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 CHST7Q9NS84 486 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 NRBP2Q9NSY0 501 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 MARCH5Q9NX47 278 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 FNIP2Q9P278 1114 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 SAMM50Q9Y512 469 aa12.41□□□□□ -0.42
PTP4A1-207ENST00000639568 CNTNAP2Q9UHC6 1331 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 WDFY3Q8IZQ1 3526 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 MEIS1O00470 390 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 GIPC1O14908 333 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 CCL16O15467 120 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 RPL17P18621 184 aaKnown RBP12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 SMARCA1P28370 1054 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 DNM2P50570 870 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 AFF1P51825 1210 aaKnown RBP12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 DAB2IPQ5VWQ8 1189 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 CWC27Q6UX04 472 aaKnown RBP12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 AGMOQ6ZNB7 445 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 NPAS3Q8IXF0 933 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 ZNF687Q8N1G0 1237 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 B3GALT6Q96L58 329 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 DSCC1Q9BVC3 393 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 COLEC11Q9BWP8 271 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 GABBR1Q9UBS5 961 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 KCNH3Q9ULD8 1083 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 WASF3Q9UPY6 502 aa12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 MRPS23Q9Y3D9 190 aaKnown RBP12.4□□□□□ -0.42
PTP4A1-207ENST00000639568 A0A087WZ62 844 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 CCER2I3L3R5 266 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 IPO5O00410 1097 aaKnown RBP12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 C8AP07357 584 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 SDSP20132 328 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 GNAQP50148 359 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 PDE1AP54750 535 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 HNRNPUQ00839 825 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 PABPC1LQ4VXU2 614 aaKnown RBP12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 SH3PXD2AQ5TCZ1 1133 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 CACNA2D4Q7Z3S7 1137 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 SMAP1Q8IYB5 467 aaPredicted RBP12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 GPR65Q8IYL9 337 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 RNF168Q8IYW5 571 aaPredicted RBP12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 ING5Q8WYH8 240 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 IRF7Q92985 503 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 MCRS1Q96EZ8 462 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 FDXACB1Q9BRP7 624 aaPredicted RBP12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 PLA2G2FQ9BZM2 168 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 SENP2Q9HC62 589 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 UBN1Q9NPG3 1134 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 DIAPH3Q9NSV4 1193 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 GDE1Q9NZC3 331 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 PCDHA10Q9Y5I2 948 aa12.39□□□□□ -0.43
PTP4A1-207ENST00000639568 AKAP13Q12802 2813 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 SALL3Q9BXA9 1300 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 HELZ2Q9BYK8 2649 aaKnown RBP12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 SHISA7A6NL88 538 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 EPN2O95208 641 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 TOP3BO95985 862 aaKnown RBP12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 FOSP01100 380 aaPredicted RBP12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 HOXA9P31269 272 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 LRRC32Q14392 662 aa12.38□□□□□ -0.43
PTP4A1-207ENST00000639568 ANKRD45Q5TZF3 282 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms