RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 DBF4BQ8NFT6 615 aa20.75■□□□□ 0.91
CCDC9-205ENST00000600117 FGFBP2Q9BYJ0 223 aa20.75■□□□□ 0.91
CCDC9-205ENST00000600117 IFIH1Q9BYX4 1025 aaKnown RBP20.75■□□□□ 0.91
CCDC9-205ENST00000600117 FZD8Q9H461 694 aa20.75■□□□□ 0.91
CCDC9-205ENST00000600117 CD320Q9NPF0 282 aa20.75■□□□□ 0.91
CCDC9-205ENST00000600117 LMCD1Q9NZU5 365 aa20.75■□□□□ 0.91
CCDC9-205ENST00000600117 KCNG1Q9UIX4 513 aa20.75■□□□□ 0.91
CCDC9-205ENST00000600117 ST3GAL5Q9UNP4 418 aa20.75■□□□□ 0.91
CCDC9-205ENST00000600117 PTPRSQ13332 1948 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 PRR33A8MZF0 331 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 INO80B-WBP1J3KQ70 363 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 MBD3O95983 291 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 RPN1P04843 607 aaKnown RBP20.74■□□□□ 0.91
CCDC9-205ENST00000600117 EDN1P05305 212 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 MAPTP10636 758 aaKnown RBP20.74■□□□□ 0.91
CCDC9-205ENST00000600117 SMTNP53814 917 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 KMT5BQ4FZB7 885 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 PPP4R3CPQ6ZMV5 832 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 HAUS6Q7Z4H7 955 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 FAM178BQ8IXR5 827 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 SPATA20Q8TB22 786 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 ERCC4Q92889 916 aaPredicted RBP20.74■□□□□ 0.91
CCDC9-205ENST00000600117 HPS3Q969F9 1004 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 TMX1Q9H3N1 280 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 CLSTN2Q9H4D0 955 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 ST6GALNAC4Q9H4F1 302 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 TMEM134Q9H6X4 195 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 PHLPP2Q6ZVD8 1323 aa20.74■□□□□ 0.91
CCDC9-205ENST00000600117 K7ENM7 598 aa20.73■□□□□ 0.91
CCDC9-205ENST00000600117 GPR182O15218 404 aa20.73■□□□□ 0.91
CCDC9-205ENST00000600117 PPP1R37O75864 691 aa20.73■□□□□ 0.91
CCDC9-205ENST00000600117 BAIAP3O94812 1187 aa20.73■□□□□ 0.91
CCDC9-205ENST00000600117 SFPQP23246 707 aaKnown RBP eCLIP20.73■□□□□ 0.91
CCDC9-205ENST00000600117 EFNA5P52803 228 aa20.73■□□□□ 0.91
CCDC9-205ENST00000600117 PAK2Q13177 524 aa20.73■□□□□ 0.91
CCDC9-205ENST00000600117 FAM187BQ17R55 369 aa20.73■□□□□ 0.91
CCDC9-205ENST00000600117 ZNF720Q7Z2F6 126 aa20.73■□□□□ 0.91
CCDC9-205ENST00000600117 SEPT8Q92599 483 aa20.73■□□□□ 0.91
CCDC9-205ENST00000600117 STRA6Q9BX79 667 aa20.73■□□□□ 0.91
CCDC9-205ENST00000600117 PRMT7Q9NVM4 692 aaPredicted RBP20.73■□□□□ 0.91
CCDC9-205ENST00000600117 TBC1D7Q9P0N9 293 aa20.73■□□□□ 0.91
CCDC9-205ENST00000600117 HOOK1Q9UJC3 728 aaKnown RBP20.73■□□□□ 0.91
CCDC9-205ENST00000600117 PCDHA5Q9Y5H7 936 aa20.73■□□□□ 0.91
CCDC9-205ENST00000600117 DENND3A2RUS2 1198 aa20.72■□□□□ 0.91
CCDC9-205ENST00000600117 TSPAN1O60635 241 aa20.72■□□□□ 0.91
CCDC9-205ENST00000600117 PRKCBP05771 671 aa20.72■□□□□ 0.91
CCDC9-205ENST00000600117 SARSP49591 514 aaKnown RBP20.72■□□□□ 0.91
CCDC9-205ENST00000600117 CASP5P51878 434 aa20.72■□□□□ 0.91
CCDC9-205ENST00000600117 GTF2BQ00403 316 aa20.72■□□□□ 0.91
CCDC9-205ENST00000600117 NFX1Q12986 1120 aaKnown RBP20.72■□□□□ 0.91
CCDC9-205ENST00000600117 DSC3Q14574 896 aa20.72■□□□□ 0.91
CCDC9-205ENST00000600117 PCBP1Q15365 356 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCDC9-205ENST00000600117 FAM26FQ5R3K3 315 aa20.72■□□□□ 0.91
CCDC9-205ENST00000600117 CNKSR3Q6P9H4 555 aa20.72■□□□□ 0.91
CCDC9-205ENST00000600117 CATSPER4Q7RTX7 472 aa20.72■□□□□ 0.91
CCDC9-205ENST00000600117 GLIS3Q8NEA6 775 aa20.72■□□□□ 0.91
CCDC9-205ENST00000600117 MRPL44Q9H9J2 332 aaKnown RBP20.72■□□□□ 0.91
CCDC9-205ENST00000600117 EXOC1Q9NV70 894 aa20.72■□□□□ 0.91
CCDC9-205ENST00000600117 TTLL13PA6NNM8 815 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 H0YCG3 227 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 K7ERI5 159 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 ACKR2O00590 384 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 B4GALT5O43286 388 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 MGEA5O60502 916 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 RHOBTB3O94955 611 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 HOXA11P31270 313 aaPredicted RBP20.71■□□□□ 0.91
CCDC9-205ENST00000600117 KCNB1Q14721 858 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 CAMK4Q16566 473 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 MAPK6Q16659 721 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 ZC2HC1CQ53FD0 456 aaPredicted RBP20.71■□□□□ 0.91
CCDC9-205ENST00000600117 SPRED2Q7Z698 418 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 LINC01599Q8WXQ3 324 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 APBB2Q92870 758 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 PRIMPOLQ96LW4 560 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 AGPAT5Q9NUQ2 364 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 USP20Q9Y2K6 914 aa20.71■□□□□ 0.91
CCDC9-205ENST00000600117 SMC2O95347 1197 aa20.7■□□□□ 0.9
CCDC9-205ENST00000600117 MYBP10242 640 aa20.7■□□□□ 0.9
CCDC9-205ENST00000600117 ARF4P18085 180 aaPredicted RBP20.7■□□□□ 0.9
CCDC9-205ENST00000600117 SCP2P22307 547 aa20.7■□□□□ 0.9
CCDC9-205ENST00000600117 NT5DC1Q5TFE4 455 aa20.7■□□□□ 0.9
CCDC9-205ENST00000600117 EPM2AIP1Q7L775 607 aaPredicted RBP20.7■□□□□ 0.9
CCDC9-205ENST00000600117 RTN4RL1Q86UN2 441 aaPredicted RBP20.7■□□□□ 0.9
CCDC9-205ENST00000600117 GJD3Q8N144 294 aa20.7■□□□□ 0.9
CCDC9-205ENST00000600117 GSDMAQ96QA5 445 aa20.7■□□□□ 0.9
CCDC9-205ENST00000600117 NUP62CLQ9H1M0 184 aa20.7■□□□□ 0.9
CCDC9-205ENST00000600117 TBX20Q9UMR3 447 aa20.7■□□□□ 0.9
CCDC9-205ENST00000600117 CNTNAP2Q9UHC6 1331 aa20.7■□□□□ 0.9
CCDC9-205ENST00000600117 MICAL3Q7RTP6 2002 aa20.7■□□□□ 0.9
CCDC9-205ENST00000600117 ERLIN2O94905 339 aa20.69■□□□□ 0.9
CCDC9-205ENST00000600117 GCNT3O95395 438 aa20.69■□□□□ 0.9
CCDC9-205ENST00000600117 PTMSP20962 102 aa20.69■□□□□ 0.9
CCDC9-205ENST00000600117 KCNJ6P48051 423 aa20.69■□□□□ 0.9
CCDC9-205ENST00000600117 STK4Q13043 487 aa20.69■□□□□ 0.9
CCDC9-205ENST00000600117 PSMD2Q13200 908 aa20.69■□□□□ 0.9
CCDC9-205ENST00000600117 FAM43BQ6ZT52 329 aaPredicted RBP20.69■□□□□ 0.9
CCDC9-205ENST00000600117 MAP4K3Q8IVH8 894 aa20.69■□□□□ 0.9
CCDC9-205ENST00000600117 KIAA0895Q8NCT3 520 aa20.69■□□□□ 0.9
CCDC9-205ENST00000600117 GDPD5Q8WTR4 605 aa20.69■□□□□ 0.9
CCDC9-205ENST00000600117 SMARCE1Q969G3 411 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms