RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 KLHL5Q96PQ7 755 aa19.54■□□□□ 0.72
SHKBP1-203ENST00000594298 FOXP1Q9H334 677 aaPredicted RBP19.54■□□□□ 0.72
SHKBP1-203ENST00000594298 UBN1Q9NPG3 1134 aa19.54■□□□□ 0.72
SHKBP1-203ENST00000594298 INPPL1O15357 1258 aa19.53■□□□□ 0.72
SHKBP1-203ENST00000594298 BAG4O95429 457 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-203ENST00000594298 CLCN4P51793 760 aa19.53■□□□□ 0.72
SHKBP1-203ENST00000594298 SPIRE1Q08AE8 756 aa19.53■□□□□ 0.72
SHKBP1-203ENST00000594298 EMC2Q15006 297 aa19.53■□□□□ 0.72
SHKBP1-203ENST00000594298 TMC5Q6UXY8 1006 aa19.53■□□□□ 0.72
SHKBP1-203ENST00000594298 RNF149Q8NC42 400 aa19.53■□□□□ 0.72
SHKBP1-203ENST00000594298 FAM193BQ96PV7 902 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-203ENST00000594298 ZSWIM4Q9H7M6 989 aa19.53■□□□□ 0.72
SHKBP1-203ENST00000594298 LIMD1Q9UGP4 676 aa19.53■□□□□ 0.72
SHKBP1-203ENST00000594298 SMC3Q9UQE7 1217 aa19.53■□□□□ 0.72
SHKBP1-203ENST00000594298 FAN1Q9Y2M0 1017 aa19.53■□□□□ 0.72
SHKBP1-203ENST00000594298 NRP1O14786 923 aa19.52■□□□□ 0.72
SHKBP1-203ENST00000594298 GALR2O43603 387 aaPredicted RBP19.52■□□□□ 0.72
SHKBP1-203ENST00000594298 ASGR2P07307 311 aa19.52■□□□□ 0.72
SHKBP1-203ENST00000594298 CNPP09543 421 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-203ENST00000594298 AXLP30530 894 aa19.52■□□□□ 0.72
SHKBP1-203ENST00000594298 SLFN12Q8IYM2 578 aa19.52■□□□□ 0.72
SHKBP1-203ENST00000594298 SMOC2Q9H3U7 446 aa19.52■□□□□ 0.72
SHKBP1-203ENST00000594298 MRPL17Q9NRX2 175 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-203ENST00000594298 RGL1Q9NZL6 768 aa19.52■□□□□ 0.72
SHKBP1-203ENST00000594298 ERLIN2O94905 339 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 POMCP01189 267 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 SOD2P04179 222 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 KLRC2P26717 231 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 POU5F1BQ06416 359 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 MXD4Q14582 209 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 EARS2Q5JPH6 523 aaKnown RBP19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 NCAPH2Q6IBW4 605 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 C15orf39Q6ZRI6 1047 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 IFNLR1Q8IU57 520 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 SMG8Q8ND04 991 aaKnown RBP19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 ATOH1Q92858 354 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 ACSF2Q96CM8 615 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 CCDC51Q96ER9 411 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 DYDC2Q96IM9 177 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 MTRQ99707 1265 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 FAM86C1Q9NVL1 165 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 SSX2IPQ9Y2D8 614 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 ZDBF2Q9HCK1 2354 aa19.51■□□□□ 0.71
SHKBP1-203ENST00000594298 TSPAN1O60635 241 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 EFEMP2O95967 443 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 GJB2P29033 226 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 PTENP60484 403 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 CTTNQ14247 550 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 XKR9Q5GH70 373 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 CCDC149Q6ZUS6 474 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 OTOP3Q7RTS5 596 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 COLGALT2Q8IYK4 626 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 RNF168Q8IYW5 571 aaPredicted RBP19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 TMEM105Q8N8V8 129 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 CMASQ8NFW8 434 aaPredicted RBP19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 FEZF2Q8TBJ5 459 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 HERC2P3Q9BVR0 1158 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 RHOBTB2Q9BYZ6 727 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 XPNPEP1Q9NQW7 623 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 BMP2KQ9NSY1 1161 aaPredicted RBP19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 MARCH5Q9NX47 278 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 IPPQ9Y573 584 aa19.5■□□□□ 0.71
SHKBP1-203ENST00000594298 FAM205CA6NFA0 338 aa19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 PROB1E7EW31 1015 aa19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 H3BQV1 296 aa19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 ZBTB39O15060 712 aa19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 GFRA3O60609 400 aa19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 SLITRK3O94933 977 aa19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 LYPLA2O95372 231 aa19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 SSBP05455 408 aaKnown RBP eCLIP19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 ITGA4P13612 1032 aa19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 CYP4A11Q02928 519 aa19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 DSC1Q08554 894 aa19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 ASTLQ6HA08 431 aaPredicted RBP19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 NOTUMQ6P988 496 aa19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 RPS6KC1Q96S38 1066 aa19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 NOL7Q9UMY1 257 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-203ENST00000594298 ARL5CA6NH57 179 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 SPDYE4A6NLX3 237 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 H0Y858 1186 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 URODP06132 367 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 TRAPPC10P48553 1259 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 CLCN5P51795 746 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 NCBP1Q09161 790 aaKnown RBP19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 ORC2Q13416 577 aaPredicted RBP19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 CUL4AQ13619 759 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 TFDP1Q14186 410 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 CYP26C1Q6V0L0 522 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 NOSTRINQ8IVI9 506 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 TPH2Q8IWU9 490 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 HSD17B14Q9BPX1 270 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 EIF2AQ9BY44 585 aaKnown RBP19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 NFKBIZQ9BYH8 718 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 CSRNP2Q9H175 543 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 DPP7Q9UHL4 492 aa19.48■□□□□ 0.71
SHKBP1-203ENST00000594298 DGAT1O75907 488 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 C1RP00736 705 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 ADH1AP07327 375 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 U2AF2P26368 475 aaKnown RBP eCLIP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms