RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 BHMT2Q9H2M3 363 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 ZSCAN16Q9H4T2 348 aaPredicted RBP11.49□□□□□ -0.57
SDF2-208ENST00000589788 ELAC1Q9H777 363 aaKnown RBP11.49□□□□□ -0.57
SDF2-208ENST00000589788 IFT122Q9HBG6 1241 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 CHST12Q9NRB3 414 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 TMEM161AQ9NX61 479 aa11.49□□□□□ -0.57
SDF2-208ENST00000589788 PIN4Q9Y237 131 aaKnown RBP11.49□□□□□ -0.57
SDF2-208ENST00000589788 FCF1Q9Y324 198 aaKnown RBP11.49□□□□□ -0.57
SDF2-208ENST00000589788 LAMA2P24043 3122 aaKnown RBP11.49□□□□□ -0.57
SDF2-208ENST00000589788 RALGAPA2Q2PPJ7 1873 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 EPOPA6NHQ4 379 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 EYA4O95677 639 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 CYP11B2P19099 503 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 GLRA2P23416 452 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 CTNNB1P35222 781 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 UBA7P41226 1012 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 PTENP60484 403 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 FAM189BP81408 668 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 NCBP1Q09161 790 aaKnown RBP11.48□□□□□ -0.57
SDF2-208ENST00000589788 ADGRE1Q14246 886 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 ECM1Q16610 540 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 ECHDC2Q86YB7 292 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 TMEM192Q8IY95 271 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 ABI1Q8IZP0 508 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 CRIPAKQ8N1N5 446 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 MICALL1Q8N3F8 863 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 RNF169Q8NCN4 708 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 RASSF8Q8NHQ8 419 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 GDPD5Q8WTR4 605 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 AK8Q96MA6 479 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 MMTAG2Q9BU76 263 aaKnown RBP11.48□□□□□ -0.57
SDF2-208ENST00000589788 TRAIPQ9BWF2 469 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 NT5C3AQ9H0P0 336 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 RC3H2Q9HBD1 1191 aaKnown RBP11.48□□□□□ -0.57
SDF2-208ENST00000589788 GPRC5CQ9NQ84 441 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 RWDD3Q9Y3V2 267 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 CLIC4Q9Y696 253 aa11.48□□□□□ -0.57
SDF2-208ENST00000589788 COL4A4P53420 1690 aaPredicted RBP11.48□□□□□ -0.57
SDF2-208ENST00000589788 SZT2Q5T011 3432 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 A0A0U1RQF3 1178 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 LRRIQ4A6NIV6 560 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 TBKBP1A7MCY6 615 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 E9PMD0 336 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 INO80B-WBP1J3KQ70 363 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 ATP9BO43861 1147 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 SKIP12755 728 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 GATMP50440 423 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 CEBPZQ03701 1054 aaKnown RBP11.47□□□□□ -0.57
SDF2-208ENST00000589788 POU5F1BQ06416 359 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 GRB10Q13322 594 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 CAPSQ13938 189 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 PPP2R5AQ15172 486 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 PCBP1Q15365 356 aaKnown RBP eCLIP11.47□□□□□ -0.57
SDF2-208ENST00000589788 EPC2Q52LR7 807 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 SPOUT1Q5T280 376 aaKnown RBP11.47□□□□□ -0.57
SDF2-208ENST00000589788 FAM173BQ6P4H8 233 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 CABP7Q86V35 215 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 FAM174AQ8TBP5 190 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 ADAM32Q8TC27 787 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 PPM1EQ8WY54 764 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 CALML4Q96GE6 196 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 IFT74Q96LB3 600 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 PLIN2Q99541 437 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 MINDY3Q9H8M7 445 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 AGPAT5Q9NUQ2 364 aa11.47□□□□□ -0.57
SDF2-208ENST00000589788 FNDC1Q4ZHG4 1894 aaPredicted RBP11.46□□□□□ -0.57
SDF2-208ENST00000589788 SLC26A4O43511 780 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 EOMESO95936 686 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 SSBP05455 408 aaKnown RBP eCLIP11.46□□□□□ -0.57
SDF2-208ENST00000589788 FGFR1P11362 822 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 LONP1P36776 959 aaKnown RBP11.46□□□□□ -0.57
SDF2-208ENST00000589788 BMPR1AP36894 532 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 RAB27AP51159 221 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 CCDC85BQ15834 202 aaPredicted RBP11.46□□□□□ -0.57
SDF2-208ENST00000589788 HYIQ5T013 277 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 FOXD4L5Q5VV16 416 aaPredicted RBP11.46□□□□□ -0.57
SDF2-208ENST00000589788 ZBTB8OSQ8IWT0 167 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 KCTD17Q8N5Z5 321 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 FOXD4L4Q8WXT5 416 aaPredicted RBP11.46□□□□□ -0.57
SDF2-208ENST00000589788 KIFAP3Q92845 792 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 CLP1Q92989 425 aaKnown RBP11.46□□□□□ -0.57
SDF2-208ENST00000589788 ARHGAP9Q9BRR9 750 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 C11orf84Q9BUA3 381 aaPredicted RBP11.46□□□□□ -0.57
SDF2-208ENST00000589788 NFKBIZQ9BYH8 718 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 C2orf40Q9H1Z8 148 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 FAM105AQ9NUU6 356 aa11.46□□□□□ -0.57
SDF2-208ENST00000589788 MRPL42Q9Y6G3 142 aaKnown RBP11.46□□□□□ -0.57
SDF2-208ENST00000589788 H3BNC9 293 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 LPXNO60711 386 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 RB1P06400 928 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 POU3F3P20264 500 aaPredicted RBP11.45□□□□□ -0.58
SDF2-208ENST00000589788 MARCKSP29966 332 aaPredicted RBP11.45□□□□□ -0.58
SDF2-208ENST00000589788 AXLP30530 894 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 DDIT3P35638 169 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 MBTD1Q05BQ5 628 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 GPM6BQ13491 265 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 PTPAQ15257 358 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 PTPROQ16827 1216 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 NOTUMQ6P988 496 aa11.45□□□□□ -0.58
SDF2-208ENST00000589788 KCNK18Q7Z418 384 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms