RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 ANKRD63C9JTQ0 380 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 TREHO43280 583 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 EXTL3O43909 919 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 N4BP1O75113 896 aaKnown RBP11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 ERLIN2O94905 339 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 AFPP02771 609 aaKnown RBP11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 VTNP04004 478 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 SFPQP23246 707 aaKnown RBP eCLIP11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 ADSSP30520 456 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 AXLP30530 894 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 MATR3P43243 847 aaKnown RBP eCLIP11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 CRYBB1P53674 252 aaPredicted RBP11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 RBM10P98175 930 aaKnown RBP11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 MBTD1Q05BQ5 628 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 ITGA7Q13683 1181 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 FAM47CQ5HY64 1035 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 MIIPQ5JXC2 388 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 FBXO46Q6PJ61 603 aaPredicted RBP11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 TMC6Q7Z403 805 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 SH3TC2Q8TF17 1288 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 BORCS6Q96GS4 357 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 ERGIC2Q96RQ1 377 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 ACO2Q99798 780 aaKnown RBP11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 CBWD1Q9BRT8 395 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 FAM49AQ9H0Q0 323 aaPredicted RBP11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 PCIF1Q9H4Z3 704 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 PAK6Q9NQU5 681 aaPredicted RBP11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 AGO2Q9UKV8 859 aaKnown RBP11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 PHF24Q9UPV7 400 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 TNFSF13BQ9Y275 285 aa11.53□□□□□ -0.56
NEDD4L-224ENST00000588712 GTPBP10A4D1E9 387 aaKnown RBP11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 DNM1LO00429 736 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 P4HA2O15460 535 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 CAND2O75155 1236 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 PBX1P40424 430 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 CTCFP49711 727 aaPredicted RBP11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 KCNH2Q12809 1159 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 BFSP1Q12934 665 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 SNRNP35Q16560 246 aaKnown RBP11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 ATF7IP2Q5U623 682 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 FAM43BQ6ZT52 329 aaPredicted RBP11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 SERINC5Q86VE9 423 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 SPC24Q8NBT2 197 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 CCDC150Q8NCX0 1101 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 TMC2Q8TDI7 906 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 DNAJB3Q8WWF6 145 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 TARS2Q9BW92 718 aaKnown RBP11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 ADAMTS10Q9H324 1103 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 SIP14410 1827 aa11.52□□□□□ -0.57
NEDD4L-224ENST00000588712 A0A0U1RQG5 324 aaPredicted RBP11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 PMM2O15305 246 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 TEX33O43247 280 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 GPR32O75388 356 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 EIF4BP23588 611 aaKnown RBP11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 GTF2H1P32780 548 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 CASP4P49662 377 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 VAMP7P51809 220 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 MCL1Q07820 350 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 PTK7Q13308 1070 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 SURF1Q15526 300 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 FIGNQ5HY92 759 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 TCERG1LQ5VWI1 586 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 SLC39A4Q6P5W5 647 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 MPZL3Q6UWV2 235 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 MFSD14AQ96MC6 490 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 ADPGKQ9BRR6 497 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 MSTO1Q9BUK6 570 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 RNF208Q9H0X6 261 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 INTS13Q9NVM9 706 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 NOD1Q9Y239 953 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 DAAM1Q9Y4D1 1078 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 CNTNAP2Q9UHC6 1331 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 GJB1P08034 283 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 MCF2P10911 925 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 DARSP14868 501 aaKnown RBP11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 PTGISQ16647 500 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 DCAF17Q5H9S7 520 aaPredicted RBP11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 RDH13Q8NBN7 331 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 SLC35C1Q96A29 364 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 ZBTB10Q96DT7 871 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 PCMTD1Q96MG8 357 aaPredicted RBP11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 CELF4Q9BZC1 486 aaKnown RBP11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 EDEM3Q9BZQ6 932 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 UNC93B1Q9H1C4 597 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 STARD7Q9NQZ5 370 aa11.51□□□□□ -0.57
NEDD4L-224ENST00000588712 OGTO15294 1046 aa11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 HSPA8P11142 646 aaKnown RBP11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 CCL5P13501 91 aa11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 PROZP22891 400 aa11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 AP3M2P53677 418 aa11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 NOLC1Q14978 699 aaKnown RBP eCLIP11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 KIZQ2M2Z5 673 aa11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 GDF6Q6KF10 455 aaPredicted RBP11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 RUFY4Q6ZNE9 571 aa11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 CCDC186Q7Z3E2 898 aa11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 CNGA4Q8IV77 575 aa11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 ZNF397Q8NF99 534 aaPredicted RBP11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 CCDC51Q96ER9 411 aa11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 FAM213AQ9BRX8 229 aa11.5□□□□□ -0.57
NEDD4L-224ENST00000588712 IKZF4Q9H2S9 585 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms