RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 SLC16A4O15374 487 aa22.18■■□□□ 1.14
SS18-218ENST00000581021 FGF18O76093 207 aa22.18■■□□□ 1.14
SS18-218ENST00000581021 PLS3P13797 630 aa22.18■■□□□ 1.14
SS18-218ENST00000581021 LAG3P18627 525 aa22.18■■□□□ 1.14
SS18-218ENST00000581021 IRS1P35568 1242 aa22.18■■□□□ 1.14
SS18-218ENST00000581021 EFNA5P52803 228 aa22.18■■□□□ 1.14
SS18-218ENST00000581021 AXDND1Q5T1B0 1012 aaPredicted RBP22.18■■□□□ 1.14
SS18-218ENST00000581021 KCNT2Q6UVM3 1135 aa22.18■■□□□ 1.14
SS18-218ENST00000581021 TMEM173Q86WV6 379 aaPredicted RBP22.18■■□□□ 1.14
SS18-218ENST00000581021 ZNF280BQ86YH2 543 aa22.18■■□□□ 1.14
SS18-218ENST00000581021 PGBD4Q96DM1 585 aa22.18■■□□□ 1.14
SS18-218ENST00000581021 ZFP42Q96MM3 310 aa22.18■■□□□ 1.14
SS18-218ENST00000581021 APOL6Q9BWW8 343 aa22.18■■□□□ 1.14
SS18-218ENST00000581021 MRPL9Q9BYD2 267 aaKnown RBP22.18■■□□□ 1.14
SS18-218ENST00000581021 KMT5AQ9NQR1 393 aa22.18■■□□□ 1.14
SS18-218ENST00000581021 PHLPP2Q6ZVD8 1323 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 INPPL1O15357 1258 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 PPP6R2O75170 966 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 ITGA4P13612 1032 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 MLH1P40692 756 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 NCBP1Q09161 790 aaKnown RBP22.17■■□□□ 1.14
SS18-218ENST00000581021 GIT2Q14161 759 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 PTPROQ16827 1216 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 SHC4Q6S5L8 630 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 SLC17A8Q8NDX2 589 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 TMEM161BQ8NDZ6 487 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 BCL7CQ8WUZ0 217 aaPredicted RBP22.17■■□□□ 1.14
SS18-218ENST00000581021 POF1BQ8WVV4 589 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 SPIRE2Q8WWL2 714 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 GAD1Q99259 594 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 NTPCRQ9BSD7 190 aaKnown RBP22.17■■□□□ 1.14
SS18-218ENST00000581021 PANK2Q9BZ23 570 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 LMAN2LQ9H0V9 348 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 CXCL16Q9H2A7 254 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 NRDE2Q9H7Z3 1164 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 C17orf75Q9HAS0 396 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 DNAJB4Q9UDY4 337 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 PCDHB12Q9Y5F1 795 aa22.17■■□□□ 1.14
SS18-218ENST00000581021 DDHD2O94830 711 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 AKAP5P24588 427 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 DDIT3P35638 169 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 ZNF131P52739 623 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 BCAR1P56945 870 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 TCEAL5Q5H9L2 206 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 THNSL1Q8IYQ7 743 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 SLC39A11Q8N1S5 342 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 GSTCDQ8NEC7 633 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 ZNF558Q96NG5 402 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 AAASQ9NRG9 546 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 MIOSQ9NXC5 875 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 STK17AQ9UEE5 414 aa22.16■■□□□ 1.14
SS18-218ENST00000581021 ARL5CA6NH57 179 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 NT5C1B-RDH14C9J2C7 533 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 K7ERI5 159 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 ABLIM1O14639 778 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 N4BP3O15049 544 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 ZC3H11AO75152 810 aaKnown RBP eCLIP22.15■■□□□ 1.14
SS18-218ENST00000581021 POMCP01189 267 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 MAPTP10636 758 aaKnown RBP22.15■■□□□ 1.14
SS18-218ENST00000581021 TFF2Q03403 129 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 TIGD5Q53EQ6 642 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 CNNM3Q8NE01 707 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 FIZ1Q96SL8 496 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 TRIM6Q9C030 488 aaPredicted RBP22.15■■□□□ 1.14
SS18-218ENST00000581021 TMEM134Q9H6X4 195 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 CCDC39Q9UFE4 941 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 ODF2LQ9ULJ1 636 aa22.15■■□□□ 1.14
SS18-218ENST00000581021 SLC11A1P49279 550 aa22.14■■□□□ 1.13
SS18-218ENST00000581021 SCNN1GP51170 649 aa22.14■■□□□ 1.13
SS18-218ENST00000581021 NCKAP1LP55160 1127 aa22.14■■□□□ 1.13
SS18-218ENST00000581021 ERVFC1P60507 584 aa22.14■■□□□ 1.13
SS18-218ENST00000581021 SKIV2LQ15477 1246 aaKnown RBP22.14■■□□□ 1.13
SS18-218ENST00000581021 ATF7IP2Q5U623 682 aa22.14■■□□□ 1.13
SS18-218ENST00000581021 RRAGBQ5VZM2 374 aa22.14■■□□□ 1.13
SS18-218ENST00000581021 ADGRD2Q7Z7M1 963 aa22.14■■□□□ 1.13
SS18-218ENST00000581021 ACO2Q99798 780 aaKnown RBP22.14■■□□□ 1.13
SS18-218ENST00000581021 TARS2Q9BW92 718 aaKnown RBP22.14■■□□□ 1.13
SS18-218ENST00000581021 GBP3Q9H0R5 595 aa22.14■■□□□ 1.13
SS18-218ENST00000581021 NSUN3Q9H649 340 aaKnown RBP22.14■■□□□ 1.13
SS18-218ENST00000581021 PTPRHQ9HD43 1115 aa22.14■■□□□ 1.13
SS18-218ENST00000581021 KLK14Q9P0G3 267 aa22.14■■□□□ 1.13
SS18-218ENST00000581021 MYH11P35749 1972 aa22.14■■□□□ 1.13
SS18-218ENST00000581021 MYMKA6NI61 221 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 GALTP07902 379 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 GTF2F1P35269 517 aaKnown RBP eCLIP22.13■■□□□ 1.13
SS18-218ENST00000581021 TXLNAP40222 546 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 PLCB3Q01970 1234 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 E2F4Q16254 413 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 TMEM132AQ24JP5 1023 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 PDILTQ8N807 584 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 RSPH1Q8WYR4 309 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 VN1R3Q9BXE9 311 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 SNTG2Q9NY99 539 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 SPG21Q9NZD8 308 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 THEGQ9P2T0 379 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 PCDHA7Q9UN72 937 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 TNFSF13BQ9Y275 285 aa22.13■■□□□ 1.13
SS18-218ENST00000581021 RBM19Q9Y4C8 960 aaKnown RBP22.13■■□□□ 1.13
SS18-218ENST00000581021 FSCN2O14926 492 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 CUTAO60888 179 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms