RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SCFD1Q8WVM8 642 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 ACCSQ96QU6 501 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 KIFC3Q9BVG8 833 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 IFIH1Q9BYX4 1025 aaKnown RBP11.42□□□□□ -0.58
CCDC47-203ENST00000580986 PPP1R12CQ9BZL4 782 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 AGO3Q9H9G7 860 aaKnown RBP11.42□□□□□ -0.58
CCDC47-203ENST00000580986 POLD4Q9HCU8 107 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 PRDM5Q9NQX1 630 aaPredicted RBP11.42□□□□□ -0.58
CCDC47-203ENST00000580986 PADI3Q9ULW8 664 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 GINS2Q9Y248 185 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 NOC2LQ9Y3T9 749 aaKnown RBP11.42□□□□□ -0.58
CCDC47-203ENST00000580986 STYXL1Q9Y6J8 313 aa11.42□□□□□ -0.58
CCDC47-203ENST00000580986 ZMYM2Q9UBW7 1377 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 N4BP3O15049 544 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 KIAA0391O15091 583 aaKnown RBP11.41□□□□□ -0.58
CCDC47-203ENST00000580986 TOM1L1O75674 476 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 BAIAP3O94812 1187 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 MYBP10242 640 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 BMP6P22004 513 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 PROZP22891 400 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 HOXA11P31270 313 aaPredicted RBP11.41□□□□□ -0.58
CCDC47-203ENST00000580986 CYP2C18P33260 490 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 POU5F1Q01860 360 aaKnown RBP11.41□□□□□ -0.58
CCDC47-203ENST00000580986 PRPF4BQ13523 1007 aaKnown RBP11.41□□□□□ -0.58
CCDC47-203ENST00000580986 STIM1Q13586 685 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 MYBPC2Q14324 1141 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 KNOP1Q1ED39 458 aaKnown RBP11.41□□□□□ -0.58
CCDC47-203ENST00000580986 NOTUMQ6P988 496 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 CNKSR3Q6P9H4 555 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 CATSPER4Q7RTX7 472 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 APBB1IPQ7Z5R6 666 aaPredicted RBP11.41□□□□□ -0.58
CCDC47-203ENST00000580986 ADSSL1Q8N142 457 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 RSPH1Q8WYR4 309 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 SEPT8Q92599 483 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 ACO2Q99798 780 aaKnown RBP11.41□□□□□ -0.58
CCDC47-203ENST00000580986 FGFBP2Q9BYJ0 223 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 GBP3Q9H0R5 595 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 PTPRHQ9HD43 1115 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 SLC39A2Q9NP94 309 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 DACH1Q9UI36 760 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 ST3GAL5Q9UNP4 418 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 TNFSF13BQ9Y275 285 aa11.41□□□□□ -0.58
CCDC47-203ENST00000580986 SCN5AQ14524 2016 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 ABHD14A-ACY1A0A1B0GW23 586 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 PDXKO00764 312 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 PSMA7O14818 248 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 HNRNPDLO14979 420 aaKnown RBP11.4□□□□□ -0.58
CCDC47-203ENST00000580986 SKIP12755 728 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 ARF4P18085 180 aaPredicted RBP11.4□□□□□ -0.58
CCDC47-203ENST00000580986 GARTP22102 1010 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 CD52P31358 61 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 HOXD13P35453 343 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 RAB27AP51159 221 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 CCL23P55773 120 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 NLRP12P59046 1061 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 FPGSQ05932 587 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 LRRC63Q05C16 580 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 DSC3Q14574 896 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 ZCWPW2Q504Y3 356 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 ZC2HC1CQ53FD0 456 aaPredicted RBP11.4□□□□□ -0.58
CCDC47-203ENST00000580986 ATF7IP2Q5U623 682 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 SLFN12LQ6IEE8 588 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 PSRC1Q6PGN9 363 aaPredicted RBP11.4□□□□□ -0.58
CCDC47-203ENST00000580986 SASS6Q6UVJ0 657 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 HS2ST1Q7LGA3 356 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 DPF3Q92784 378 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 ERCC4Q92889 916 aaPredicted RBP11.4□□□□□ -0.58
CCDC47-203ENST00000580986 KHSRPQ92945 711 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC47-203ENST00000580986 HPS3Q969F9 1004 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 VWCEQ96DN2 955 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 DHTKD1Q96HY7 919 aaPredicted RBP11.4□□□□□ -0.58
CCDC47-203ENST00000580986 PPP1R16BQ96T49 567 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 KCTD10Q9H3F6 313 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 IL23AQ9NPF7 189 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 C1orf112Q9NSG2 853 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 TYW1Q9NV66 732 aaKnown RBP11.4□□□□□ -0.58
CCDC47-203ENST00000580986 ANO10Q9NW15 660 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 TBC1D7Q9P0N9 293 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 TRAF3IP3Q9Y228 551 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 GDAQ9Y2T3 454 aa11.4□□□□□ -0.58
CCDC47-203ENST00000580986 MICAL3Q7RTP6 2002 aa11.4□□□□□ -0.59
CCDC47-203ENST00000580986 ABLIM1O14639 778 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 TGFB1I1O43294 461 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 ZNF623O75123 536 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 PRPF6O94906 941 aaKnown RBP11.39□□□□□ -0.59
CCDC47-203ENST00000580986 CAVIN2O95810 425 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 CSF2RAP15509 400 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 ZSCAN20P17040 1043 aaPredicted RBP11.39□□□□□ -0.59
CCDC47-203ENST00000580986 ERCC5P28715 1186 aaPredicted RBP11.39□□□□□ -0.59
CCDC47-203ENST00000580986 PRCPP42785 496 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 LIG4P49917 911 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 MCL1Q07820 350 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 STX1AQ16623 288 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 KYAT1Q16773 422 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 EDRF1Q3B7T1 1238 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 DCAF4L1Q3SXM0 396 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 CENPPQ6IPU0 288 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 SLC27A1Q6PCB7 646 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 MPZL3Q6UWV2 235 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 SLC9A9Q8IVB4 645 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms