RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 CT47A1Q5JQC4 288 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-212ENST00000580061 KLHL10Q6JEL2 608 aa17.42■□□□□ 0.38
CSNK1D-212ENST00000580061 NOTUMQ6P988 496 aa17.42■□□□□ 0.38
CSNK1D-212ENST00000580061 DEFB128Q7Z7B8 93 aa17.42■□□□□ 0.38
CSNK1D-212ENST00000580061 DBF4BQ8NFT6 615 aa17.42■□□□□ 0.38
CSNK1D-212ENST00000580061 SEPT8Q92599 483 aa17.42■□□□□ 0.38
CSNK1D-212ENST00000580061 BADQ92934 168 aa17.42■□□□□ 0.38
CSNK1D-212ENST00000580061 P2RX5Q93086 422 aa17.42■□□□□ 0.38
CSNK1D-212ENST00000580061 PDZD7Q9H5P4 517 aa17.42■□□□□ 0.38
CSNK1D-212ENST00000580061 PTPRHQ9HD43 1115 aa17.42■□□□□ 0.38
CSNK1D-212ENST00000580061 ZMYND8Q9ULU4 1186 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-212ENST00000580061 PDXKO00764 312 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 ABLIM1O14639 778 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 N4BP3O15049 544 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 TOM1L1O75674 476 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 CCNE1P24864 410 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 PMS1P54277 932 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 ZNF445P59923 1031 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 SNRPFP62306 86 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 PAK1Q13153 545 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 DSC3Q14574 896 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 TMEM132AQ24JP5 1023 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 ZCWPW2Q504Y3 356 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 EEF1DP3Q658K8 133 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 FAM43BQ6ZT52 329 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 C11orf57Q6ZUT1 292 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 HS2ST1Q7LGA3 356 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 CDR2LQ86X02 465 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 NELFBQ8WX92 580 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 APBB2Q92870 758 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 CCDC51Q96ER9 411 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 ZBTB45Q96K62 511 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 FTHL17Q9BXU8 183 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 HAPLN2Q9GZV7 340 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 AGPAT3Q9NRZ7 376 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 CGNQ9P2M7 1197 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 CTNND2Q9UQB3 1225 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 TRAF3IP3Q9Y228 551 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 STYXL1Q9Y6J8 313 aa17.41■□□□□ 0.38
CSNK1D-212ENST00000580061 MGEA5O60502 916 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 ZSCAN20P17040 1043 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 ERCC5P28715 1186 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 ADSSP30520 456 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 RGS19P49795 217 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 TCTN1Q2MV58 587 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 ANO6Q4KMQ2 910 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 SLFN12LQ6IEE8 588 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 LRSAM1Q6UWE0 723 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 MPZL3Q6UWV2 235 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 RPUSD2Q8IZ73 545 aaKnown RBP17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 GOLGA5Q8TBA6 731 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 DNAJC25Q9H1X3 360 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 ANKFY1Q9P2R3 1169 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 RWDD2AQ9UIY3 292 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 NR2E3Q9Y5X4 410 aa17.4■□□□□ 0.38
CSNK1D-212ENST00000580061 TRIM49BA6NDI0 452 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 CLIC2O15247 247 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 CLDN3O15551 220 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 CALUO43852 315 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 PFKMP08237 780 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 GARTP22102 1010 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 STX17P56962 302 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 FPGSQ05932 587 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 LRRC63Q05C16 580 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 MCL1Q07820 350 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 PPIGQ13427 754 aaKnown RBP eCLIP17.39■□□□□ 0.375e-22■□□□□ 9.3
CSNK1D-212ENST00000580061 NFIL3Q16649 462 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 ZNF568Q3ZCX4 644 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 UBXN11Q5T124 520 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 ANKRD40Q6AI12 368 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 TWF2Q6IBS0 349 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 TTI2Q6NXR4 508 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 CNKSR3Q6P9H4 555 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 SLC27A1Q6PCB7 646 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 FOXR2Q6PJQ5 311 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 C12orf56Q8IXR9 622 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 TMEM174Q8WUU8 243 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 LINC01599Q8WXQ3 324 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 POMGNT1Q8WZA1 660 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 MED15Q96RN5 788 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 ADPGKQ9BRR6 497 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 CBWD1Q9BRT8 395 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 TCHPQ9BT92 498 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 TRAIPQ9BWF2 469 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 CDT1Q9H211 546 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 IL23AQ9NPF7 189 aa17.39■□□□□ 0.37
CSNK1D-212ENST00000580061 A0A0B4J269 797 aa17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 BICDL2A1A5D9 508 aa17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 MCF2P10911 925 aa17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 MATR3P43243 847 aaKnown RBP eCLIP17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 NOLC1Q14978 699 aaKnown RBP eCLIP17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 EDRF1Q3B7T1 1238 aa17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 ARMCX5Q6P1M9 558 aa17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 ZBTB33Q86T24 672 aa17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 RTN4RL1Q86UN2 441 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 TSG101Q99816 390 aa17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 ADAM2Q99965 735 aa17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 EIF2AQ9BY44 585 aaKnown RBP17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 RGS18Q9NS28 235 aa17.38■□□□□ 0.37
CSNK1D-212ENST00000580061 CITO14578 2027 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms