RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 CALM1P0DP23 149 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 CALM2P0DP24 149 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 CALM3P0DP25 149 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 TDGF1P13385 188 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 HOXA9P31269 272 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 ADCY7P51828 1080 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 USP41Q3LFD5 358 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 PPM1LQ5SGD2 360 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 FAM208BQ5VWN6 2430 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 CASC1Q6TDU7 716 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 WDR87Q6ZQQ6 2873 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 CEP68Q76N32 757 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 GLYCTKQ8IVS8 523 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 GPR65Q8IYL9 337 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 RNF168Q8IYW5 571 aaPredicted RBP6.63□□□□□ -1.35
SMG6-219ENST00000575663 SRBD1Q8N5C6 995 aaKnown RBP6.63□□□□□ -1.35
SMG6-219ENST00000575663 KDF1Q8NAX2 398 aaPredicted RBP6.63□□□□□ -1.35
SMG6-219ENST00000575663 PATJQ8NI35 1801 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 PGBD1Q96JS3 809 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 GLT8D2Q9H1C3 349 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 SENP2Q9HC62 589 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 RIC8AQ9NPQ8 531 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 HEBP1Q9NRV9 189 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 MARCH5Q9NX47 278 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 FNIP2Q9P278 1114 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 NDRG2Q9UN36 371 aaKnown RBP6.63□□□□□ -1.35
SMG6-219ENST00000575663 POLIQ9UNA4 740 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 PCDHB2Q9Y5E7 798 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 PCDHB15Q9Y5E8 787 aa6.63□□□□□ -1.35
SMG6-219ENST00000575663 SPTBN2O15020 2390 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 A0A087WZ62 844 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 hCG_1984214I3L0E3 225 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 B4GALT3O60512 393 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 KCNK5O95279 499 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 C8AP07357 584 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 CXCL12P48061 93 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 PABPC1LQ4VXU2 614 aaKnown RBP6.62□□□□□ -1.35
SMG6-219ENST00000575663 PSAPL1Q6NUJ1 521 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 FUT10Q6P4F1 479 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 MAMSTRQ6ZN01 415 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 AGMOQ6ZNB7 445 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 LONP2Q86WA8 852 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 COLGALT2Q8IYK4 626 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 CMTR1Q8N1G2 835 aaKnown RBP6.62□□□□□ -1.35
SMG6-219ENST00000575663 TMTC2Q8N394 836 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 ZNF713Q8N859 430 aaPredicted RBP6.62□□□□□ -1.35
SMG6-219ENST00000575663 CNNM3Q8NE01 707 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 NLRP4Q96MN2 994 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 MBOAT7Q96N66 472 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 JPH2Q9BR39 696 aaPredicted RBP6.62□□□□□ -1.35
SMG6-219ENST00000575663 FDXACB1Q9BRP7 624 aaPredicted RBP6.62□□□□□ -1.35
SMG6-219ENST00000575663 COLEC11Q9BWP8 271 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 ADAM33Q9BZ11 813 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 CHST7Q9NS84 486 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 AGPAT5Q9NUQ2 364 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 FBXW11Q9UKB1 542 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 KCNH3Q9ULD8 1083 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 LHX6Q9UPM6 363 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 PKD1L2Q7Z442 2459 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 C2orf16Q68DN1 1984 aa6.62□□□□□ -1.35
SMG6-219ENST00000575663 SF3B1O75533 1304 aaKnown RBP eCLIP6.61□□□□□ -1.35
SMG6-219ENST00000575663 SPEGQ15772 3267 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 IGLV3-22A0A075B6J6 115 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 hCG_1642624A0A1W2PR95 340 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 E7EWF7 191 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 FAM86B1E9PN63 330 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 CCL16O15467 120 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 DHX15O43143 795 aaKnown RBP6.61□□□□□ -1.35
SMG6-219ENST00000575663 CYP21A2P08686 494 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 POU2F2P09086 479 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 FAM86B2P0C5J1 330 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 ITGA4P13612 1032 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 RXRAP19793 462 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 MLH1P40692 756 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 NTHL1P78549 312 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 FOXC1Q12948 553 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 LRRC32Q14392 662 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 MTERF2Q49AM1 385 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 STPG1Q5TH74 334 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 WWC2Q6AWC2 1192 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 LILRA6Q6PI73 481 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 C1orf228Q6PIY5 440 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 LRSAM1Q6UWE0 723 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 TAS1R1Q7RTX1 841 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 RHPN2Q8IUC4 686 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 NPAS3Q8IXF0 933 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 HACE1Q8IYU2 909 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 CCDC82Q8N4S0 544 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 FAM160A2Q8N612 972 aaPredicted RBP6.61□□□□□ -1.35
SMG6-219ENST00000575663 ITFG1Q8TB96 612 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 ZCCHC14Q8WYQ9 949 aaKnown RBP6.61□□□□□ -1.35
SMG6-219ENST00000575663 FAM3CQ92520 227 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 KIF12Q96FN5 646 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 MTA3Q9BTC8 594 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 LNPKQ9C0E8 428 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 BRD9Q9H8M2 597 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 GDE1Q9NZC3 331 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 SEPT9Q9UHD8 586 aaPredicted RBP6.61□□□□□ -1.35
SMG6-219ENST00000575663 ADAM28Q9UKQ2 775 aa6.61□□□□□ -1.35
SMG6-219ENST00000575663 COL4A3Q01955 1670 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms