RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 SPATA31C1P0DKV0 1188 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 LIG1P18858 919 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 NCLP19338 710 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 GLRA2P23416 452 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 HOXA11P31270 313 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 ARL2P36404 184 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 CCT6AP40227 531 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 MLH1P40692 756 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 TRAPPC10P48553 1259 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 SLC11A1P49279 550 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 MBTD1Q05BQ5 628 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 UBXN11Q5T124 520 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 ANKRD54Q6NXT1 300 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 TMEM173Q86WV6 379 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 CDR2LQ86X02 465 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 ZNF280BQ86YH2 543 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 AUTS2Q8WXX7 1259 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 RPGRIP1Q96KN7 1286 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 POLR3CQ9BUI4 534 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 RAB34Q9BZG1 259 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 ZBP1Q9H171 429 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 CSRNP2Q9H175 543 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 UBN1Q9NPG3 1134 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 GPRC5CQ9NQ84 441 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 KANSL3Q9P2N6 904 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 MUTYHQ9UIF7 546 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 DBR1Q9UK59 544 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 MTCL1Q9Y4B5 1905 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 DENND4AQ7Z401 1863 aa10.7□□□□□ -0.7
NPLOC4-216ENST00000574344 C2orf71A6NGG8 1288 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 B4GALT5O43286 388 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 DDHD2O94830 711 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 XRCC6P12956 609 aaKnown RBP eCLIP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 ARF4P18085 180 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 SP100P23497 879 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 RPA1P27694 616 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 OR1G1P47890 313 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 SCNN1GP51170 649 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 POU5F1BQ06416 359 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 CUL4AQ13619 759 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 GIT2Q14161 759 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 CBX2Q14781 532 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 CES5AQ6NT32 575 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 SLC27A1Q6PCB7 646 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 PADI6Q6TGC4 694 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 MRPL10Q7Z7H8 261 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 DDX53Q86TM3 631 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 IFNLR1Q8IU57 520 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 RNF135Q8IUD6 432 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 MRPL43Q8N983 215 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 SMG8Q8ND04 991 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 SNX29Q8TEQ0 813 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 BCL7CQ8WUZ0 217 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 RPS6KC1Q96S38 1066 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 PHF7Q9BWX1 381 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 C2orf40Q9H1Z8 148 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 NXF3Q9H4D5 531 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 PRMT7Q9NVM4 692 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 LRWD1Q9UFC0 647 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 PARP2Q9UGN5 583 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 FAN1Q9Y2M0 1017 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 PRG3Q9Y2Y8 225 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 HES2Q9Y543 173 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 HCFC2Q9Y5Z7 792 aa10.69□□□□□ -0.7
NPLOC4-216ENST00000574344 ARL5CA6NH57 179 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 H3BQV1 296 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 B4GALT3O60512 393 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 CLASP2O75122 1294 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 NR1I2O75469 434 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 ALDH2P05091 517 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 CTSAP10619 480 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 PDIA4P13667 645 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 HOXB8P17481 243 aaPredicted RBP10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 FXR2P51116 673 aaKnown RBP eCLIP10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 AFF1P51825 1210 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 PTGDRQ13258 359 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 PPP2R5AQ15172 486 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 ZBTB33Q86T24 672 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 DEPTORQ8TB45 409 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 IFT74Q96LB3 600 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 PRIMPOLQ96LW4 560 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 ZFP42Q96MM3 310 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 GAD1Q99259 594 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 TMEM175Q9BSA9 504 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 NFKBIZQ9BYH8 718 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 RNF39Q9H2S5 420 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 C11orf16Q9NQ32 467 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 DDX19AQ9NUU7 478 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 STK39Q9UEW8 545 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 PCDHB6Q9Y5E3 794 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 STK24Q9Y6E0 443 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 MYO10Q9HD67 2058 aa10.68□□□□□ -0.7
NPLOC4-216ENST00000574344 PRR33A8MZF0 331 aa10.67□□□□□ -0.7
NPLOC4-216ENST00000574344 C2CD2LO14523 706 aa10.67□□□□□ -0.7
NPLOC4-216ENST00000574344 NRP1O14786 923 aa10.67□□□□□ -0.7
NPLOC4-216ENST00000574344 N4BP3O15049 544 aa10.67□□□□□ -0.7
NPLOC4-216ENST00000574344 PRKCBP05771 671 aa10.67□□□□□ -0.7
NPLOC4-216ENST00000574344 URODP06132 367 aa10.67□□□□□ -0.7
NPLOC4-216ENST00000574344 MUTP22033 750 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms