RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 GSTCDQ8NEC7 633 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 AUTS2Q8WXX7 1259 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 TMEM169Q96HH4 297 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 ZFP42Q96MM3 310 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 GAD1Q99259 594 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 ZBP1Q9H171 429 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 S1PR5Q9H228 398 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 NXF3Q9H4D5 531 aaKnown RBP16.23■□□□□ 0.19
FANCA-220ENST00000566409 C11orf16Q9NQ32 467 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 DDX19AQ9NUU7 478 aaKnown RBP16.23■□□□□ 0.19
FANCA-220ENST00000566409 USP20Q9Y2K6 914 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 KIF3AQ9Y496 699 aa16.23■□□□□ 0.19
FANCA-220ENST00000566409 E9PMD0 336 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 LAD1O00515 517 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 CXCL14O95715 111 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 ATP2C1P98194 919 aaPredicted RBP16.22■□□□□ 0.19
FANCA-220ENST00000566409 SMC1AQ14683 1233 aaKnown RBP16.22■□□□□ 0.19
FANCA-220ENST00000566409 FAM187BQ17R55 369 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 RILPL1Q5EBL4 403 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 LLGL2Q6P1M3 1020 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 SYCE2Q6PIF2 218 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 KCNK18Q7Z418 384 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 DDX53Q86TM3 631 aaKnown RBP16.22■□□□□ 0.19
FANCA-220ENST00000566409 URGCPQ8TCY9 931 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 SNX29Q8TEQ0 813 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 CCDC113Q9H0I3 377 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 SMC3Q9UQE7 1217 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 USP15Q9Y4E8 981 aaPredicted RBP16.22■□□□□ 0.19
FANCA-220ENST00000566409 TRIP11Q15643 1979 aa16.22■□□□□ 0.19
FANCA-220ENST00000566409 NRP1O14786 923 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 CLASP2O75122 1294 aaKnown RBP16.21■□□□□ 0.19
FANCA-220ENST00000566409 NPTXRO95502 500 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 AKAP5P24588 427 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 MLH1P40692 756 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 DSC1Q08554 894 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 NCBP1Q09161 790 aaKnown RBP16.21■□□□□ 0.19
FANCA-220ENST00000566409 SLC27A1Q6PCB7 646 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 DTHD1Q6ZMT9 781 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 COLGALT2Q8IYK4 626 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 KIFC3Q9BVG8 833 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 APOL6Q9BWW8 343 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 C1QTNF1Q9BXJ1 281 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 UBN1Q9NPG3 1134 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 PRMT7Q9NVM4 692 aaPredicted RBP16.21■□□□□ 0.19
FANCA-220ENST00000566409 KANSL3Q9P2N6 904 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 HCFC2Q9Y5Z7 792 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 IRAK3Q9Y616 596 aa16.21■□□□□ 0.19
FANCA-220ENST00000566409 F8W810 466 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 H3BQV1 296 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 EFEMP2O95967 443 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 ALDH2P05091 517 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 CTSAP10619 480 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 SCNN1GP51170 649 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 CUL4AQ13619 759 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 LARP1BQ659C4 914 aaKnown RBP16.2■□□□□ 0.18
FANCA-220ENST00000566409 ANKRD54Q6NXT1 300 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 DAW1Q8N136 415 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 SUSD6Q92537 303 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 PRIMPOLQ96LW4 560 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 TMEM175Q9BSA9 504 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 BACH2Q9BYV9 841 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 RAB34Q9BZG1 259 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 CXCL16Q9H2A7 254 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 PDZD7Q9H5P4 517 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 MARCH5Q9NX47 278 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 RAPGEFL1Q9UHV5 662 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 CDH22Q9UJ99 828 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 FAN1Q9Y2M0 1017 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 GIT1Q9Y2X7 761 aa16.2■□□□□ 0.18
FANCA-220ENST00000566409 MYH11P35749 1972 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 LILRB3O75022 631 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 NAMPTP43490 491 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 KRT79Q5XKE5 535 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 TAS1R1Q7RTX1 841 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 ZBTB8OSQ8IWT0 167 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 PNMA5Q96PV4 448 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 FAM193BQ96PV7 902 aaPredicted RBP16.19■□□□□ 0.18
FANCA-220ENST00000566409 LRFN3Q9BTN0 628 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 RUSC1Q9BVN2 902 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 APOL5Q9BWW9 433 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 TRIM6Q9C030 488 aaPredicted RBP16.19■□□□□ 0.18
FANCA-220ENST00000566409 C2orf40Q9H1Z8 148 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 KLK14Q9P0G3 267 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 PRG3Q9Y2Y8 225 aaPredicted RBP16.19■□□□□ 0.18
FANCA-220ENST00000566409 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.19■□□□□ 0.18
FANCA-220ENST00000566409 STK24Q9Y6E0 443 aa16.19■□□□□ 0.18
FANCA-220ENST00000566409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.18■□□□□ 0.18
FANCA-220ENST00000566409 CARNS1A5YM72 827 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 FAM86C2PA6NEL3 165 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 ACKR2O00590 384 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 PRKCBP05771 671 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 COL9A1P20849 921 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 MAPK7Q13164 816 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 PRPF4BQ13523 1007 aaKnown RBP16.18■□□□□ 0.18
FANCA-220ENST00000566409 PTPN14Q15678 1187 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 MAPK6Q16659 721 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 HYIQ5T013 277 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 EEF1DP3Q658K8 133 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 RINT1Q6NUQ1 792 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms