RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 ZNF888P0CJ79 500 aaPredicted RBP6.02□□□□□ -1.45
LINC00560-201ENST00000564593 ADSLP30566 484 aaPredicted RBP6.02□□□□□ -1.45
LINC00560-201ENST00000564593 IL10RAQ13651 578 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 USP10Q14694 798 aaKnown RBP6.02□□□□□ -1.45
LINC00560-201ENST00000564593 PGS1Q32NB8 556 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 C3orf36Q3SXR2 165 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 TAS1R1Q7RTX1 841 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 GPR155Q7Z3F1 870 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 CLEC14AQ86T13 490 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 KLHL36Q8N4N3 616 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 OR2I1PQ8NGU4 316 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 ADAMTS17Q8TE56 1095 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 DIS3LQ8TF46 1054 aaKnown RBP6.02□□□□□ -1.45
LINC00560-201ENST00000564593 SNX33Q8WV41 574 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 GCDHQ92947 438 aaPredicted RBP6.02□□□□□ -1.45
LINC00560-201ENST00000564593 C7orf25Q9BPX7 421 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 C1orf112Q9NSG2 853 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 SLC52A1Q9NWF4 448 aa6.02□□□□□ -1.45
LINC00560-201ENST00000564593 RBM8AQ9Y5S9 174 aaKnown RBP6.02□□□□□ -1.45
LINC00560-201ENST00000564593 C2orf78A6NCI8 922 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 NPIPB6E9PJ23 425 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 PHF2O75151 1096 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 MAP4K4O95819 1239 aaPredicted RBP6.01□□□□□ -1.45
LINC00560-201ENST00000564593 CSF2RBP32927 897 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 GBX1Q14549 363 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 GRM3Q14832 879 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 VMACQ2NL98 169 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 C19orf54Q5BKX5 351 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 FAM26FQ5R3K3 315 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 GJC2Q5T442 439 aaPredicted RBP6.01□□□□□ -1.45
LINC00560-201ENST00000564593 CAMKK1Q8N5S9 505 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 MARCH10Q8NA82 808 aaPredicted RBP6.01□□□□□ -1.45
LINC00560-201ENST00000564593 PLA2G15Q8NCC3 412 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 TIFAQ96CG3 184 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 C1GALT1C1Q96EU7 318 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 ACO2Q99798 780 aaKnown RBP6.01□□□□□ -1.45
LINC00560-201ENST00000564593 DDX20Q9UHI6 824 aaKnown RBP6.01□□□□□ -1.45
LINC00560-201ENST00000564593 ADAM29Q9UKF5 820 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 PTPN22Q9Y2R2 807 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 PCDHA13Q9Y5I0 950 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 FRMPD2Q68DX3 1309 aaPredicted RBP6.01□□□□□ -1.45
LINC00560-201ENST00000564593 C9orf118A6NHY6 69 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 ALDH1A2O94788 518 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 MYL1P05976 194 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 MYBP10242 640 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 ECHS1P30084 290 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 SEPT2Q15019 361 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 ZNF827Q17R98 1081 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 MAP9Q49MG5 647 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 ZMAT1Q5H9K5 638 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 AGBL4Q5VU57 503 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 KSR2Q6VAB6 950 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 RHOT1Q8IXI2 618 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 MSL3Q8N5Y2 521 aaKnown RBP6.01□□□□□ -1.45
LINC00560-201ENST00000564593 LINC01356Q8N9X3 169 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.01□□□□□ -1.45
LINC00560-201ENST00000564593 LPPQ93052 612 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 LCORQ96JN0 433 aaPredicted RBP6.01□□□□□ -1.45
LINC00560-201ENST00000564593 OR10A2Q9H208 303 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 C14orf93Q9H972 538 aaKnown RBP6.01□□□□□ -1.45
LINC00560-201ENST00000564593 ARNT2Q9HBZ2 717 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 TLR9Q9NR96 1032 aa6.01□□□□□ -1.45
LINC00560-201ENST00000564593 CTDP1Q9Y5B0 961 aaPredicted RBP6.01□□□□□ -1.45
LINC00560-201ENST00000564593 ENDOD1O94919 500 aa6□□□□□ -1.45
LINC00560-201ENST00000564593 KIR2DL3P43628 341 aa6□□□□□ -1.45
LINC00560-201ENST00000564593 PER3P56645 1201 aa6□□□□□ -1.45
LINC00560-201ENST00000564593 PPP4R3AQ6IN85 833 aa6□□□□□ -1.45
LINC00560-201ENST00000564593 Q6ZVL8 140 aa6□□□□□ -1.45
LINC00560-201ENST00000564593 ZNF761Q86XN6 746 aaPredicted RBP6□□□□□ -1.45
LINC00560-201ENST00000564593 TMEM151BQ8IW70 566 aa6□□□□□ -1.45
LINC00560-201ENST00000564593 ZBTB34Q8NCN2 500 aa6□□□□□ -1.45
LINC00560-201ENST00000564593 KAT5Q92993 513 aa6□□□□□ -1.45
LINC00560-201ENST00000564593 SLC7A6OSQ96CW6 309 aaPredicted RBP6□□□□□ -1.45
LINC00560-201ENST00000564593 FAM193BQ96PV7 902 aaPredicted RBP6□□□□□ -1.45
LINC00560-201ENST00000564593 ING3Q9NXR8 418 aa6□□□□□ -1.45
LINC00560-201ENST00000564593 JAG2Q9Y219 1238 aa6□□□□□ -1.45
LINC00560-201ENST00000564593 CFAP20Q9Y6A4 193 aaKnown RBP6□□□□□ -1.45
LINC00560-201ENST00000564593 PLIN1O60240 522 aa5.99□□□□□ -1.45
LINC00560-201ENST00000564593 RPLP2P05387 115 aaKnown RBP5.99□□□□□ -1.45
LINC00560-201ENST00000564593 MST1LQ2TV78 715 aa5.99□□□□□ -1.45
LINC00560-201ENST00000564593 USP30Q70CQ3 517 aa5.99□□□□□ -1.45
LINC00560-201ENST00000564593 RALYLQ86SE5 291 aaKnown RBP5.99□□□□□ -1.45
LINC00560-201ENST00000564593 TP53I13Q8NBR0 393 aaPredicted RBP5.99□□□□□ -1.45
LINC00560-201ENST00000564593 PPP1R35Q8TAP8 253 aa5.99□□□□□ -1.45
LINC00560-201ENST00000564593 ZNF480Q8WV37 535 aa5.99□□□□□ -1.45
LINC00560-201ENST00000564593 HOXB13Q92826 284 aaPredicted RBP5.99□□□□□ -1.45
LINC00560-201ENST00000564593 MAN1C1Q9NR34 630 aa5.99□□□□□ -1.45
LINC00560-201ENST00000564593 NUAK1O60285 661 aa5.98□□□□□ -1.45
LINC00560-201ENST00000564593 TOX4O94842 621 aa5.98□□□□□ -1.45
LINC00560-201ENST00000564593 WNT3AP56704 352 aa5.98□□□□□ -1.45
LINC00560-201ENST00000564593 ATP2C1P98194 919 aaPredicted RBP5.98□□□□□ -1.45
LINC00560-201ENST00000564593 DSC2Q02487 901 aa5.98□□□□□ -1.45
LINC00560-201ENST00000564593 PPP4R4Q6NUP7 873 aa5.98□□□□□ -1.45
LINC00560-201ENST00000564593 TTC7BQ86TV6 843 aa5.98□□□□□ -1.45
LINC00560-201ENST00000564593 DENND1CQ8IV53 801 aa5.98□□□□□ -1.45
LINC00560-201ENST00000564593 DRC7Q8IY82 874 aa5.98□□□□□ -1.45
LINC00560-201ENST00000564593 OR14K1Q8NGZ2 314 aa5.98□□□□□ -1.45
LINC00560-201ENST00000564593 UHRF1Q96T88 793 aaPredicted RBP5.98□□□□□ -1.45
LINC00560-201ENST00000564593 MANSC1Q9H8J5 431 aa5.98□□□□□ -1.45
LINC00560-201ENST00000564593 PCDHB1Q9Y5F3 818 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms