RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 ACO2Q99798 780 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 TARS2Q9BW92 718 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 STRA6Q9BX79 667 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 TTYH1Q9H313 450 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 ST6GALNAC4Q9H4F1 302 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 PDZD7Q9H5P4 517 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 SLC28A3Q9HAS3 691 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 TBC1D7Q9P0N9 293 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 SEL1LQ9UBV2 794 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 TBX20Q9UMR3 447 aa13.14□□□□□ -0.31
RABGGTA-218ENST00000560777 LINC01553A4QN01 128 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 MEIS3P2A8K0S8 358 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 K7ENM7 598 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 N4BP3O15049 544 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 SCP2P22307 547 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 ASIC1P78348 528 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 TAP1Q03518 808 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 STRN3Q13033 797 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 ZC2HC1CQ53FD0 456 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 ATF7IP2Q5U623 682 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 EEF1DP3Q658K8 133 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 KRBA2Q6ZNG9 492 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 CCDC65Q8IXS2 484 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 CNNM3Q8NE01 707 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 LPPQ93052 612 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 CASD1Q96PB1 797 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 MRPL4Q9BYD3 311 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 RNF39Q9H2S5 420 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 SEMA6BQ9H3T3 888 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 ZNF576Q9H609 170 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 MRPL44Q9H9J2 332 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 PTPRHQ9HD43 1115 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 OLFML3Q9NRN5 406 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 TNFSF13BQ9Y275 285 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 IPPQ9Y573 584 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 CHD9Q3L8U1 2897 aa13.13□□□□□ -0.31
RABGGTA-218ENST00000560777 TMEM265A0A087WTH1 108 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 PVALEFA0A1B0GWK0 134 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 TBKBP1A7MCY6 615 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 PRPF40AO75400 957 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 PPP1R37O75864 691 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 NPTXRO95502 500 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 PROZP22891 400 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 EHHADHQ08426 723 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 COASYQ13057 564 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 BTG3Q14201 252 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 TMEM132AQ24JP5 1023 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 CLLU1OSQ5K130 101 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 AGMOQ6ZNB7 445 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 UNC13DQ70J99 1090 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 SPRED2Q7Z698 418 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 CMTR2Q8IYT2 770 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 SLC17A8Q8NDX2 589 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 HPS3Q969F9 1004 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 PGBD4Q96DM1 585 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 ZBTB45Q96K62 511 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 FGFBP2Q9BYJ0 223 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 HES2Q9Y543 173 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 COL4A6Q14031 1691 aa13.12□□□□□ -0.31
RABGGTA-218ENST00000560777 ABLIM1O14639 778 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 HOXA2O43364 376 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 GTPBP6O43824 516 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 KLRC4O43908 158 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 NR1I2O75469 434 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 OFD1O75665 1012 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 MYL1P05976 194 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 LINC00271P0C7V0 271 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 ITGA4P13612 1032 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 AFF1P51825 1210 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 CASP5P51878 434 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 FAM160A1Q05DH4 1040 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 KCNA1Q09470 495 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 PAN2Q504Q3 1202 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 ZNF697Q5TEC3 545 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 ZPBP2Q6X784 338 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 LRRC55Q6ZSA7 311 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 Q7L0L9 218 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 FIBCD1Q8N539 461 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 GLIS3Q8NEA6 775 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 HELQQ8TDG4 1101 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 TRIM6Q9C030 488 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 TMEM117Q9H0C3 514 aa13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 NXF3Q9H4D5 531 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-218ENST00000560777 TOM1L1O75674 476 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 GCNT3O95395 438 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 PIGRP01833 764 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 MYBP10242 640 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 AKAP5P24588 427 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 ABCD1P33897 745 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 ERVK-21P61565 698 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 DPYDQ12882 1025 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 GRIN2CQ14957 1233 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 KANK3Q6NY19 840 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 ZBTB33Q86T24 672 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 MAP4K3Q8IVH8 894 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 DEFB123Q8N688 67 aa13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 CLP1Q92989 425 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-218ENST00000560777 FAM161BQ96MY7 647 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms