RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 KRT40Q6A162 431 aa4.16□□□□□ -1.74
SCFD1-213ENST00000554776 GLB1L2Q8IW92 636 aa4.16□□□□□ -1.74
SCFD1-213ENST00000554776 WDR75Q8IWA0 830 aaKnown RBP4.16□□□□□ -1.74
SCFD1-213ENST00000554776 SH3RF3Q8TEJ3 882 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-213ENST00000554776 AUTS2Q8WXX7 1259 aa4.16□□□□□ -1.74
SCFD1-213ENST00000554776 HOOK2Q96ED9 719 aa4.16□□□□□ -1.74
SCFD1-213ENST00000554776 DPP7Q9UHL4 492 aa4.16□□□□□ -1.74
SCFD1-213ENST00000554776 TCEAL9Q9UHQ7 104 aa4.16□□□□□ -1.74
SCFD1-213ENST00000554776 UBE2QL1A1L167 161 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 ALDH1A2O94788 518 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 MTHFD2P13995 350 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 TNFRSF1AP19438 455 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 NEK2P51955 445 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 NRG3P56975 720 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 MEF2AQ02078 507 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-213ENST00000554776 MGAT5Q09328 741 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 PUM1Q14671 1186 aaKnown RBP eCLIP4.15□□□□□ -1.75
SCFD1-213ENST00000554776 PTPN21Q16825 1174 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 FAM111BQ6SJ93 734 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 LMBR1LQ6UX01 489 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 TAS1R1Q7RTX1 841 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 SPRED1Q7Z699 444 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 CMTM4Q8IZR5 234 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 D2HGDHQ8N465 521 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 MSL3Q8N5Y2 521 aaKnown RBP4.15□□□□□ -1.75
SCFD1-213ENST00000554776 C1orf162Q8NEQ5 155 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-213ENST00000554776 TCF25Q9BQ70 676 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 ENKD1Q9H0I2 346 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 TLR9Q9NR96 1032 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 ZNF277Q9NRM2 450 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-213ENST00000554776 DNAJC28Q9NX36 388 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 ING3Q9NXR8 418 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 ZIM2Q9NZV7 527 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 SCOCQ9UIL1 159 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 RCAN3Q9UKA8 241 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 NOB1Q9ULX3 412 aaKnown RBP4.15□□□□□ -1.75
SCFD1-213ENST00000554776 SH3BP1Q9Y3L3 701 aa4.15□□□□□ -1.75
SCFD1-213ENST00000554776 NRP1O14786 923 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 AKAP10O43572 662 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 SCGB1D2O95969 90 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 OSMP13725 252 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 ACRV1P26436 265 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 EPHB1P54762 984 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 KRT85P78386 507 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 HHEXQ03014 270 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 PPP2R5AQ15172 486 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 PCBP2Q15366 365 aaKnown RBP eCLIP4.14□□□□□ -1.753e-9■■■■□ 20
SCFD1-213ENST00000554776 ADRM1Q16186 407 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 NFE2Q16621 373 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-213ENST00000554776 ANO4Q32M45 955 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 SPTY2D1Q68D10 685 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-213ENST00000554776 ZBTB46Q86UZ6 589 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 IFT122Q9HBG6 1241 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 HECAQ9UBI9 543 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-213ENST00000554776 IP6K2Q9UHH9 426 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 GPR45Q9Y5Y3 372 aa4.14□□□□□ -1.75
SCFD1-213ENST00000554776 CAPN14A8MX76 684 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 PLSCR1O15162 318 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 CYP27B1O15528 508 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 PRPF3O43395 683 aaKnown RBP4.13□□□□□ -1.75
SCFD1-213ENST00000554776 TSPAN6O43657 245 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 PCDHGA12O60330 932 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 CFBP00751 764 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 LTA4HP09960 611 aaKnown RBP4.13□□□□□ -1.75
SCFD1-213ENST00000554776 RBP3P10745 1247 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 AGXTP21549 392 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 HIBADHP31937 336 aaKnown RBP4.13□□□□□ -1.75
SCFD1-213ENST00000554776 NPEPPSP55786 919 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 WNT3AP56704 352 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 CCT2P78371 535 aaKnown RBP4.13□□□□□ -1.75
SCFD1-213ENST00000554776 CDK17Q00537 523 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 UBE3CQ15386 1083 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 FKBP15Q5T1M5 1219 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 MBNL2Q5VZF2 373 aaKnown RBP4.13□□□□□ -1.75
SCFD1-213ENST00000554776 PGM2L1Q6PCE3 622 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 ABHD15Q6UXT9 468 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 RNF207Q6ZRF8 634 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 C14orf80Q86SX3 495 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 SGMS1Q86VZ5 419 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 AMOTL1Q8IY63 956 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 ANKRD35Q8N283 1001 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 GLB1L3Q8NCI6 653 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-213ENST00000554776 SSH1Q8WYL5 1049 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 MIEF2Q96C03 454 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 FUBP3Q96I24 572 aaKnown RBP eCLIP4.13□□□□□ -1.75
SCFD1-213ENST00000554776 FAXDC2Q96IV6 333 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 RTFDC1Q9BY42 306 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-213ENST00000554776 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 SLC13A1Q9BZW2 595 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 NCDNQ9UBB6 729 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 GABBR1Q9UBS5 961 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 LUC7L2Q9Y383 392 aaKnown RBP4.13□□□□□ -1.75
SCFD1-213ENST00000554776 PCDHGA9Q9Y5G4 932 aaKnown RBP4.13□□□□□ -1.75
SCFD1-213ENST00000554776 PCDHGA8Q9Y5G5 932 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 PCDHGA7Q9Y5G6 932 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 PCDHGA6Q9Y5G7 932 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 PCDHGA3Q9Y5H0 932 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 PCDHGA2Q9Y5H1 932 aa4.13□□□□□ -1.75
SCFD1-213ENST00000554776 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 CCND1P24385 295 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms