RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 SNRNP35Q16560 246 aaKnown RBP11.87□□□□□ -0.51
PABPN1-203ENST00000553960 LHX8Q68G74 356 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 C15orf39Q6ZRI6 1047 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 TMEM139Q8IV31 216 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 RNF149Q8NC42 400 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 OR8K1Q8NGG5 319 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 KIAA1524Q8TCG1 905 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 JAKMIP2Q96AA8 810 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 FAM81BQ96LP2 452 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 CBWD1Q9BRT8 395 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.87□□□□□ -0.51
PABPN1-203ENST00000553960 CEP72Q9P209 647 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 FRMPD3Q5JV73 1810 aa11.87□□□□□ -0.51
PABPN1-203ENST00000553960 A0A1B0GUA9 196 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 ZNF233A6NK53 670 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 OGTO15294 1046 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 ARHGAP6O43182 974 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 GPR32O75388 356 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 KRT13P13646 458 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 GRK4P32298 578 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 FMO5P49326 533 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 LIG4P49917 911 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 SOX10P56693 466 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 CCZ1BP86790 482 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 CCZ1P86791 482 aaPredicted RBP11.86□□□□□ -0.51
PABPN1-203ENST00000553960 SYCP1Q15431 976 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 GNASQ5JWF2 1037 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 C1orf220Q5T0J3 134 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 GBP6Q6ZN66 633 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 ZNF662Q6ZS27 426 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 MAEAQ7L5Y9 396 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 APBB1IPQ7Z5R6 666 aaPredicted RBP11.86□□□□□ -0.51
PABPN1-203ENST00000553960 RNF180Q86T96 592 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 SERINC5Q86VE9 423 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 PPFIBP1Q86W92 1011 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 NT5DC4Q86YG4 428 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 DNAJC5GQ8N7S2 189 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 LMO3Q8TAP4 145 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 RAET1EQ8TD07 263 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 TRAIPQ9BWF2 469 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 KCNF1Q9H3M0 494 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 POLD4Q9HCU8 107 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 HMX1Q9NP08 348 aaPredicted RBP11.86□□□□□ -0.51
PABPN1-203ENST00000553960 XPNPEP3Q9NQH7 507 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 LUC7L2Q9Y383 392 aaKnown RBP11.86□□□□□ -0.51
PABPN1-203ENST00000553960 TRIP12Q14669 1992 aaPredicted RBP11.86□□□□□ -0.51
PABPN1-203ENST00000553960 ATP8B3O60423 1300 aa11.86□□□□□ -0.51
PABPN1-203ENST00000553960 TTC26A0AVF1 554 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 C17orf102A2RUQ5 167 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 ESPNB1AK53 854 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 CLIC2O15247 247 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 CLDN3O15551 220 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 SORBS3O60504 671 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 NOL4O94818 638 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 TUBB4AP04350 444 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 PRKCBP05771 671 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 PTMAP06454 111 aaKnown RBP11.85□□□□□ -0.51
PABPN1-203ENST00000553960 MCF2P10911 925 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 PTGS1P23219 599 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 VAMP7P51809 220 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 CRYBB1P53674 252 aaPredicted RBP11.85□□□□□ -0.51
PABPN1-203ENST00000553960 CYP24A1Q07973 514 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 CETN1Q12798 172 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 EXOC3L4Q17RC7 722 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 FAM26DQ5JW98 314 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 MPZL3Q6UWV2 235 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 CRELD2Q6UXH1 353 aaPredicted RBP11.85□□□□□ -0.51
PABPN1-203ENST00000553960 TMTC1Q8IUR5 882 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 CD302Q8IX05 232 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 ARRDC4Q8NCT1 418 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 ZNF397Q8NF99 534 aaPredicted RBP11.85□□□□□ -0.51
PABPN1-203ENST00000553960 POMGNT1Q8WZA1 660 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 BAP1Q92560 729 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 SUGCTQ9HAC7 445 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 TMEM8AQ9HCN3 771 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 PAK6Q9NQU5 681 aaPredicted RBP11.85□□□□□ -0.51
PABPN1-203ENST00000553960 SPTLC3Q9NUV7 552 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 AIPL1Q9NZN9 384 aa11.85□□□□□ -0.51
PABPN1-203ENST00000553960 AGO2Q9UKV8 859 aaKnown RBP11.85□□□□□ -0.51
PABPN1-203ENST00000553960 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.85□□□□□ -0.51
PABPN1-203ENST00000553960 B4GALT4O60513 344 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 GFPT2O94808 682 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 C6orf222P0C671 652 aaPredicted RBP11.84□□□□□ -0.51
PABPN1-203ENST00000553960 DARSP14868 501 aaKnown RBP11.84□□□□□ -0.51
PABPN1-203ENST00000553960 EIF4BP23588 611 aaKnown RBP11.84□□□□□ -0.51
PABPN1-203ENST00000553960 PON1P27169 355 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 FXR1P51114 621 aaKnown RBP eCLIP11.84□□□□□ -0.51
PABPN1-203ENST00000553960 CLCN3P51790 818 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 PKN2Q16513 984 aaKnown RBP11.84□□□□□ -0.51
PABPN1-203ENST00000553960 EPC2Q52LR7 807 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 HSP90AA4PQ58FG1 418 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 CEP135Q66GS9 1140 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 RHPN2Q8IUC4 686 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 KSR1Q8IVT5 923 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 BRSK2Q8IWQ3 736 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 CCDC170Q8IYT3 715 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 LRRC71Q8N4P6 559 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 METTL13Q8N6R0 699 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 C7orf31Q8N865 590 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 USP38Q8NB14 1042 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms