RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 COL4A3Q01955 1670 aa7.7□□□□□ -1.18
PRPF40B-214ENST00000551320 DCHS1Q96JQ0 3298 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 ZNF292O60281 2723 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 WDR64B1ANS9 1081 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 GFRA3O60609 400 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 RPS6KB1P23443 525 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 PHKA2P46019 1235 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 SLC26A2P50443 739 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 PLCB3Q01970 1234 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 KRT17Q04695 432 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 TOB2Q14106 344 aaPredicted RBP7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 TARBP2Q15633 366 aaKnown RBP7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 NPY5RQ15761 445 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 INF2Q27J81 1249 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 EARS2Q5JPH6 523 aaKnown RBP7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 TWF2Q6IBS0 349 aaKnown RBP7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 BLOC1S2Q6QNY1 142 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 ANO5Q75V66 913 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 LRRC43Q8N309 656 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 ARMC2Q8NEN0 867 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 FLCNQ8NFG4 579 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 SLC5A5Q92911 643 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 CPB2Q96IY4 423 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 RIPOR3Q96MK2 946 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 APOL6Q9BWW8 343 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 TEKT3Q9BXF9 490 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 CXCL16Q9H2A7 254 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 POLD4Q9HCU8 107 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 NRBP2Q9NSY0 501 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 TBC1D22BQ9NU19 505 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 TBC1D13Q9NVG8 400 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 RGL1Q9NZL6 768 aa7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 PUF60Q9UHX1 559 aaKnown RBP7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 PRG3Q9Y2Y8 225 aaPredicted RBP7.69□□□□□ -1.18
PRPF40B-214ENST00000551320 GVINP1Q7Z2Y8 2422 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 A0A0U1RQF3 1178 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 POM121CA8CG34 1229 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 WNT7AO00755 349 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 N4BP1O75113 896 aaKnown RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 OFD1O75665 1012 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 PSMD10O75832 226 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 GALTP07902 379 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 IGFBP6P24592 240 aaPredicted RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 CIITAP33076 1130 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 AKAP17AQ02040 695 aaKnown RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 UBE3AQ05086 875 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 RNASELQ05823 741 aaKnown RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 VAC14Q08AM6 782 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 CTTNQ14247 550 aaKnown RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 SMC1AQ14683 1233 aaKnown RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 TSGA10IPQ3SY00 556 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 PLA2G2CQ5R387 149 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 AGMOQ6ZNB7 445 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 CATSPER4Q7RTX7 472 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 BMP8AQ7Z5Y6 402 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 FRMD5Q7Z6J6 570 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 SMAP1Q8IYB5 467 aaPredicted RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 SLC22A17Q8WUG5 538 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 PRPF31Q8WWY3 499 aaKnown RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 TNPO1Q92973 898 aaKnown RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 EIF2AQ9BY44 585 aaKnown RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 ZBP1Q9H171 429 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 SLKQ9H2G2 1235 aaPredicted RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 ELAC1Q9H777 363 aaKnown RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 MIOSQ9NXC5 875 aa7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 DBR1Q9UK59 544 aaKnown RBP7.68□□□□□ -1.18
PRPF40B-214ENST00000551320 FAM186AA6NE01 2351 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 PLXNA3P51805 1871 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 ESYT2A0FGR8 921 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 MAGEB2O15479 319 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 RFPL2O75678 378 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 CNPP09543 421 aaKnown RBP7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 RPL17P18621 184 aaKnown RBP7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 TMOD1P28289 359 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 HSPA4P34932 840 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 ALDH7A1P49419 539 aaKnown RBP7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 SETQ01105 290 aaPredicted RBP7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 CYP4A11Q02928 519 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 PTPN14Q15678 1187 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 LETM2Q2VYF4 491 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 NOMO2Q5JPE7 1267 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 UBXN11Q5T124 520 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 TMEM184AQ6ZMB5 413 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 PALB2Q86YC2 1186 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 TMEM87AQ8NBN3 555 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 ETNPPLQ8TBG4 499 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 KCNB2Q92953 911 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 TMEM169Q96HH4 297 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 IGSF21Q96ID5 467 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 ZFP42Q96MM3 310 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 GCOM2Q9BZD3 368 aaPredicted RBP7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 IFT122Q9HBG6 1241 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 NGRNQ9NPE2 291 aaKnown RBP7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 FAM105AQ9NUU6 356 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 PLA2G2EQ9NZK7 142 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 KLK14Q9P0G3 267 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 PCDHA4Q9UN74 947 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 LZTS1Q9Y250 596 aa7.67□□□□□ -1.18
PRPF40B-214ENST00000551320 PCDHB2Q9Y5E7 798 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms