RNA–Protein interactions for RNA: ENST00000546710.2

LINC02404-201, Transcript of long intergenic non-protein coding RNA 2404, humanhuman

TSL 5 BASIC

Gene LINC02404, Length 1,188 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02404-201ENST00000546710 TMEM177Q53S58 311 aa6.78□□□□□ -1.32
LINC02404-201ENST00000546710 TCTN3Q6NUS6 607 aa6.78□□□□□ -1.32
LINC02404-201ENST00000546710 CXXC5Q7LFL8 322 aaKnown RBP6.78□□□□□ -1.32
LINC02404-201ENST00000546710 SPRED1Q7Z699 444 aa6.78□□□□□ -1.32
LINC02404-201ENST00000546710 PALM2Q8IXS6 379 aa6.78□□□□□ -1.32
LINC02404-201ENST00000546710 Q8TCH9 128 aa6.78□□□□□ -1.32
LINC02404-201ENST00000546710 SH3RF3Q8TEJ3 882 aaPredicted RBP6.78□□□□□ -1.32
LINC02404-201ENST00000546710 DLG3Q92796 817 aa6.78□□□□□ -1.32
LINC02404-201ENST00000546710 NEIL1Q96FI4 390 aaPredicted RBP6.78□□□□□ -1.32
LINC02404-201ENST00000546710 GBP4Q96PP9 640 aa6.78□□□□□ -1.32
LINC02404-201ENST00000546710 RNF186Q9NXI6 227 aa6.78□□□□□ -1.32
LINC02404-201ENST00000546710 CDC42EP3Q9UKI2 254 aa6.78□□□□□ -1.32
LINC02404-201ENST00000546710 B3GALT1Q9Y5Z6 326 aa6.78□□□□□ -1.32
LINC02404-201ENST00000546710 COL5A2P05997 1499 aaPredicted RBP6.78□□□□□ -1.32
LINC02404-201ENST00000546710 WDR17Q8IZU2 1322 aa6.77□□□□□ -1.32
LINC02404-201ENST00000546710 MKI67P46013 3256 aaKnown RBP6.77□□□□□ -1.33
LINC02404-201ENST00000546710 FOXP2O15409 715 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 HMGCRP04035 888 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 EPHX2P34913 555 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 TMF1P82094 1093 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 CD83Q01151 205 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 KCTD2Q14681 263 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 TMEM132BQ14DG7 1078 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 RNF151Q2KHN1 245 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 KANK2Q63ZY3 851 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 LARP4Q71RC2 724 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC02404-201ENST00000546710 OTOP2Q7RTS6 562 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 TAX1BP1Q86VP1 789 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 C2orf69Q8N8R5 385 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 GIMAP8Q8ND71 665 aaPredicted RBP6.77□□□□□ -1.33
LINC02404-201ENST00000546710 HIPK4Q8NE63 616 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 CLUHP3Q96NS8 147 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 OR10A5Q9H207 317 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 FBXO10Q9UK96 956 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 USP47Q96K76 1375 aa6.77□□□□□ -1.33
LINC02404-201ENST00000546710 PRAMEF22A3QJZ6 481 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 PLD2O14939 933 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 NPTXRO95502 500 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 EN2P19622 333 aaPredicted RBP6.76□□□□□ -1.33
LINC02404-201ENST00000546710 SELENOPP49908 381 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 RAC3P60763 192 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 IRF9Q00978 393 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 NFE2L2Q16236 605 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 ZMAT1Q5H9K5 638 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 WDR48Q8TAF3 677 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 SCYL1Q96KG9 808 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 CDK5RAP1Q96SZ6 601 aaKnown RBP6.76□□□□□ -1.33
LINC02404-201ENST00000546710 KIAA1683Q9H0B3 1180 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 ZFR2Q9UPR6 939 aaKnown RBP6.76□□□□□ -1.33
LINC02404-201ENST00000546710 TCAF1Q9Y4C2 921 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 SPTBN5Q9NRC6 3674 aaKnown RBP6.76□□□□□ -1.33
LINC02404-201ENST00000546710 IQGAP3Q86VI3 1631 aa6.76□□□□□ -1.33
LINC02404-201ENST00000546710 HIP1RO75146 1068 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 SDHAP31040 664 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 ZXDAP98168 799 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 SQSTM1Q13501 440 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 EIF4HQ15056 248 aaKnown RBP6.75□□□□□ -1.33
LINC02404-201ENST00000546710 TBR1Q16650 682 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 CATSPEREQ5SY80 951 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 SMIM5Q71RC9 77 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 Q7L0L9 218 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 DPYSL5Q9BPU6 564 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 NR2E1Q9Y466 385 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 ASB1Q9Y576 335 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 ARFGEF1Q9Y6D6 1849 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 SBF1O95248 1867 aa6.75□□□□□ -1.33
LINC02404-201ENST00000546710 BTAF1O14981 1849 aa6.74□□□□□ -1.33
LINC02404-201ENST00000546710 CCDC7Q96M83 1385 aa6.74□□□□□ -1.33
LINC02404-201ENST00000546710 A0A0G2JNJ9 132 aa6.74□□□□□ -1.33
LINC02404-201ENST00000546710 GCP02774 474 aa6.74□□□□□ -1.33
LINC02404-201ENST00000546710 ZBTB48P10074 688 aaPredicted RBP6.74□□□□□ -1.33
LINC02404-201ENST00000546710 CST9Q5W186 159 aa6.74□□□□□ -1.33
LINC02404-201ENST00000546710 OTOP1Q7RTM1 612 aa6.74□□□□□ -1.33
LINC02404-201ENST00000546710 ERCC4Q92889 916 aaPredicted RBP6.74□□□□□ -1.33
LINC02404-201ENST00000546710 HTATIP2Q9BUP3 242 aa6.74□□□□□ -1.33
LINC02404-201ENST00000546710 KANSL2Q9H9L4 492 aa6.74□□□□□ -1.33
LINC02404-201ENST00000546710 Q9UFV3 132 aa6.74□□□□□ -1.33
LINC02404-201ENST00000546710 OAZ3Q9UMX2 235 aa6.74□□□□□ -1.33
LINC02404-201ENST00000546710 CLTCL1P53675 1640 aa6.74□□□□□ -1.33
LINC02404-201ENST00000546710 N4BP2Q86UW6 1770 aaPredicted RBP6.74□□□□□ -1.33
LINC02404-201ENST00000546710 EIF3AQ14152 1382 aaKnown RBP6.73□□□□□ -1.33
LINC02404-201ENST00000546710 GOLGA6L22H0YM25 854 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 M0R2C6 588 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 MATN2O00339 956 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 MUSKO15146 869 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 GLRX3O76003 335 aaKnown RBP6.73□□□□□ -1.33
LINC02404-201ENST00000546710 KRT37O76014 449 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 CR2P20023 1033 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 MECP2P51608 486 aaKnown RBP6.73□□□□□ -1.33
LINC02404-201ENST00000546710 MOGSQ13724 837 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 PCOLCEQ15113 449 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 AGBL4Q5VU57 503 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 TMEM200BQ69YZ2 307 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 TRIM68Q6AZZ1 485 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 ZCCHC8Q6NZY4 707 aaKnown RBP6.73□□□□□ -1.33
LINC02404-201ENST00000546710 FILIP1Q7Z7B0 1213 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 DDX53Q86TM3 631 aaKnown RBP6.73□□□□□ -1.33
LINC02404-201ENST00000546710 SH3TC2Q8TF17 1288 aa6.73□□□□□ -1.33
LINC02404-201ENST00000546710 MRFAP1L1Q96HT8 127 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms