RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 INPPL1O15357 1258 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 MED24O75448 989 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 POMCP01189 267 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 ARF4P18085 180 aaPredicted RBP10.37□□□□□ -0.75
YBX3-218ENST00000546298 U2AF2P26368 475 aaKnown RBP eCLIP10.37□□□□□ -0.752e-11■■□□□ 14.5
YBX3-218ENST00000546298 CCT6AP40227 531 aaKnown RBP10.37□□□□□ -0.75
YBX3-218ENST00000546298 FXR2P51116 673 aaKnown RBP eCLIP10.37□□□□□ -0.75
YBX3-218ENST00000546298 RBM10P98175 930 aaKnown RBP10.37□□□□□ -0.75
YBX3-218ENST00000546298 PDIA5Q14554 519 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 SLC27A1Q6PCB7 646 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 SYCE2Q6PIF2 218 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 MAEAQ7L5Y9 396 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 TMEM173Q86WV6 379 aaPredicted RBP10.37□□□□□ -0.75
YBX3-218ENST00000546298 DEPTORQ8TB45 409 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 CPB2Q96IY4 423 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 RPGRIP1Q96KN7 1286 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 GAD1Q99259 594 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 EIF2AQ9BY44 585 aaKnown RBP10.37□□□□□ -0.75
YBX3-218ENST00000546298 ADAM7Q9H2U9 754 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 DNAJB4Q9UDY4 337 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 LRWD1Q9UFC0 647 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 HCFC2Q9Y5Z7 792 aa10.37□□□□□ -0.75
YBX3-218ENST00000546298 EVPLQ92817 2033 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 ARL5CA6NH57 179 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 NRP1O14786 923 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 DDHD2O94830 711 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 MTHFRP42898 656 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 NAMPTP43490 491 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 MCM2P49736 904 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 MAPK6Q16659 721 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 AMHR2Q16671 573 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 FAM187BQ17R55 369 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 TMEM132AQ24JP5 1023 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 ATAT1Q5SQI0 421 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 ELMSAN1Q6PJG2 1045 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 POTEGQ6S5H5 508 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 COLGALT2Q8IYK4 626 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 EDAQ92838 391 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 FAM122AQ96E09 287 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 IFT74Q96LB3 600 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 RIPOR3Q96MK2 946 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 COLEC11Q9BWP8 271 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 APOL6Q9BWW8 343 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 APOL5Q9BWW9 433 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 GPRC5CQ9NQ84 441 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 MRPL17Q9NRX2 175 aaKnown RBP10.36□□□□□ -0.75
YBX3-218ENST00000546298 PARP2Q9UGN5 583 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 MUTYHQ9UIF7 546 aa10.36□□□□□ -0.75
YBX3-218ENST00000546298 SPDYE4A6NLX3 237 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 N4BP3O15049 544 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 B4GALT5O43286 388 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 NPTXRO95502 500 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 SOD2P04179 222 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 URODP06132 367 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 KLRC2P26717 231 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 MLH1P40692 756 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 PRPHP41219 470 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 OR1G1P47890 313 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 EFNA5P52803 228 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 DSC1Q08554 894 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 PTGDRQ13258 359 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 PTPN14Q15678 1187 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 RILPL1Q5EBL4 403 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 KRT79Q5XKE5 535 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 CDCA2Q69YH5 1023 aaPredicted RBP10.35□□□□□ -0.75
YBX3-218ENST00000546298 MCTP1Q6DN14 999 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 KIAA1841Q6NSI8 718 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 APBB1IPQ7Z5R6 666 aaPredicted RBP10.35□□□□□ -0.75
YBX3-218ENST00000546298 CABP7Q86V35 215 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 C4orf32Q8N8J7 132 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 SLC22A17Q8WUG5 538 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 BCL7CQ8WUZ0 217 aaPredicted RBP10.35□□□□□ -0.75
YBX3-218ENST00000546298 AUTS2Q8WXX7 1259 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 KIFAP3Q92845 792 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 MFSD14AQ96MC6 490 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 RPS6KC1Q96S38 1066 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 ADPGKQ9BRR6 497 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 BHMT2Q9H2M3 363 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 FZD8Q9H461 694 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 DPP7Q9UHL4 492 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 RAPGEFL1Q9UHV5 662 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 KIAA1024Q9UPX6 916 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 PRG3Q9Y2Y8 225 aaPredicted RBP10.35□□□□□ -0.75
YBX3-218ENST00000546298 NR2E1Q9Y466 385 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 HES2Q9Y543 173 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 ZMYM2Q9UBW7 1377 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 CDH23Q9H251 3354 aa10.35□□□□□ -0.75
YBX3-218ENST00000546298 H3BQV1 296 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 ACKR2O00590 384 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 B4GALT3O60512 393 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 SSBP05455 408 aaKnown RBP eCLIP10.34□□□□□ -0.75
YBX3-218ENST00000546298 PRKCBP05771 671 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 ADH1AP07327 375 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 PLA2G5P39877 138 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 SCNN1GP51170 649 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 AFF1P51825 1210 aaKnown RBP10.34□□□□□ -0.75
YBX3-218ENST00000546298 GRIK3Q13003 919 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 PRPF4BQ13523 1007 aaKnown RBP10.34□□□□□ -0.75
YBX3-218ENST00000546298 DTHD1Q6ZMT9 781 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 ZBTB33Q86T24 672 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms