RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 COBLL1Q53SF7 1204 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 SVIPQ8NHG7 77 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 NSUN6Q8TEA1 469 aaKnown RBP8.08□□□□□ -1.12
LEMD3-206ENST00000545026 PMM1Q92871 262 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 DACT3Q96B18 629 aaPredicted RBP8.08□□□□□ -1.12
LEMD3-206ENST00000545026 CGRRF1Q99675 332 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 CARD11Q9BXL7 1154 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 KIAA1683Q9H0B3 1180 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 TMEM168Q9H0V1 697 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 FAM204AQ9H8W3 233 aa8.08□□□□□ -1.12
LEMD3-206ENST00000545026 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.08□□□□□ -1.12
LEMD3-206ENST00000545026 SMG5Q9UPR3 1016 aaKnown RBP8.08□□□□□ -1.12
LEMD3-206ENST00000545026 APAF1O14727 1248 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 FFAR3O14843 346 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 ENDOD1O94919 500 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 ZNF888P0CJ79 500 aaPredicted RBP8.07□□□□□ -1.12
LEMD3-206ENST00000545026 ECHS1P30084 290 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 SARSP49591 514 aaKnown RBP8.07□□□□□ -1.12
LEMD3-206ENST00000545026 LLGL1Q15334 1064 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 PPP4R3AQ6IN85 833 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 TTC7BQ86TV6 843 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 RHOT1Q8IXI2 618 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 KIAA0319LQ8IZA0 1049 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 ADGRG2Q8IZP9 1017 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 PLA2G15Q8NCC3 412 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 DMRTA2Q96SC8 542 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 CD320Q9NPF0 282 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 TLR9Q9NR96 1032 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 ADAM29Q9UKF5 820 aa8.07□□□□□ -1.12
LEMD3-206ENST00000545026 A0A1B0GTL3 188 aa8.06□□□□□ -1.12
LEMD3-206ENST00000545026 SGTAO43765 313 aa8.06□□□□□ -1.12
LEMD3-206ENST00000545026 ALDH1A2O94788 518 aa8.06□□□□□ -1.12
LEMD3-206ENST00000545026 PHKG2P15735 406 aa8.06□□□□□ -1.12
LEMD3-206ENST00000545026 HTR1BP28222 390 aa8.06□□□□□ -1.12
LEMD3-206ENST00000545026 MAP2K6P52564 334 aa8.06□□□□□ -1.12
LEMD3-206ENST00000545026 WNT3AP56704 352 aa8.06□□□□□ -1.12
LEMD3-206ENST00000545026 USP10Q14694 798 aaKnown RBP8.06□□□□□ -1.12
LEMD3-206ENST00000545026 SAFBQ15424 915 aaKnown RBP eCLIP8.06□□□□□ -1.12
LEMD3-206ENST00000545026 MCTP2Q6DN12 878 aa8.06□□□□□ -1.12
LEMD3-206ENST00000545026 MCTP1Q6DN14 999 aa8.06□□□□□ -1.12
LEMD3-206ENST00000545026 KLHL36Q8N4N3 616 aa8.06□□□□□ -1.12
LEMD3-206ENST00000545026 LILRA3Q8N6C8 439 aaPredicted RBP8.06□□□□□ -1.12
LEMD3-206ENST00000545026 TXNDC5Q8NBS9 432 aaKnown RBP8.06□□□□□ -1.12
LEMD3-206ENST00000545026 OR10A2Q9H208 303 aa8.06□□□□□ -1.12
LEMD3-206ENST00000545026 C14orf93Q9H972 538 aaKnown RBP8.06□□□□□ -1.12
LEMD3-206ENST00000545026 ING3Q9NXR8 418 aa8.06□□□□□ -1.12
LEMD3-206ENST00000545026 ANO9A1A5B4 782 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 TCAF2A6NFQ2 919 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 FAM227AF5H4B4 570 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 FARP2O94887 1054 aaPredicted RBP8.05□□□□□ -1.12
LEMD3-206ENST00000545026 CYP1A1P04798 512 aaPredicted RBP8.05□□□□□ -1.12
LEMD3-206ENST00000545026 C1QTNF9P0C862 333 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 KIR2DL3P43628 341 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 AGFG1P52594 562 aaKnown RBP8.05□□□□□ -1.12
LEMD3-206ENST00000545026 RRADP55042 308 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 CDC42EP1Q00587 391 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 AGBL4Q5VU57 503 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 IL31Q6EBC2 164 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 NPNTQ6UXI9 565 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 DRC7Q8IY82 874 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 CARFQ8N187 725 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 FAM156AQ8NDB6 213 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 ZNF480Q8WV37 535 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 GCDHQ92947 438 aaPredicted RBP8.05□□□□□ -1.12
LEMD3-206ENST00000545026 LPPQ93052 612 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 RGMAQ96B86 450 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 MBD6Q96DN6 1003 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 RPS6KC1Q96S38 1066 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 B3GNT5Q9BYG0 378 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 BCO1Q9HAY6 547 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 BARX1Q9HBU1 254 aaPredicted RBP8.05□□□□□ -1.12
LEMD3-206ENST00000545026 KMT5AQ9NQR1 393 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 TRPS1Q9UHF7 1281 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 USP25Q9UHP3 1055 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 FAM184BQ9ULE4 1060 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 FAM50BQ9Y247 325 aa8.05□□□□□ -1.12
LEMD3-206ENST00000545026 RBM8AQ9Y5S9 174 aaKnown RBP8.05□□□□□ -1.12
LEMD3-206ENST00000545026 C9orf118A6NHY6 69 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 RFXAPO00287 272 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 SLC16A6O15403 523 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 RPLP2P05387 115 aaKnown RBP8.04□□□□□ -1.12
LEMD3-206ENST00000545026 NBPF7P0C2Y1 421 aaPredicted RBP8.04□□□□□ -1.12
LEMD3-206ENST00000545026 SREBF1P36956 1147 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 IL12RB1P42701 662 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 TARDBPQ13148 414 aaKnown RBP eCLIP8.04□□□□□ -1.12
LEMD3-206ENST00000545026 BIRC2Q13490 618 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 FAM26FQ5R3K3 315 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 GPR155Q7Z3F1 870 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 OR7D4Q8NG98 312 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 KLHDC4Q8TBB5 520 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 ADAMTS17Q8TE56 1095 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 RAB24Q969Q5 203 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 SLC7A6OSQ96CW6 309 aaPredicted RBP8.04□□□□□ -1.12
LEMD3-206ENST00000545026 MRGPRX4Q96LA9 322 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 PPP1R16BQ96T49 567 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 PDCD2LQ9BRP1 358 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 MANSC1Q9H8J5 431 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 TDP1Q9NUW8 608 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 L1RE1Q9UN81 338 aa8.04□□□□□ -1.12
LEMD3-206ENST00000545026 STXBP5LQ9Y2K9 1186 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms