RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 ADAM9Q13443 819 aa18.32■□□□□ 0.52
NELFA-216ENST00000542778 TBC1D10BQ4KMP7 808 aaPredicted RBP18.32■□□□□ 0.52
NELFA-216ENST00000542778 TNFAIP8L3Q5GJ75 292 aa18.32■□□□□ 0.52
NELFA-216ENST00000542778 PPP1R15BQ5SWA1 713 aa18.32■□□□□ 0.52
NELFA-216ENST00000542778 KRT25Q7Z3Z0 450 aa18.32■□□□□ 0.52
NELFA-216ENST00000542778 NEK8Q86SG6 692 aa18.32■□□□□ 0.52
NELFA-216ENST00000542778 CCDC125Q86Z20 511 aa18.32■□□□□ 0.52
NELFA-216ENST00000542778 EPS8L3Q8TE67 593 aaKnown RBP18.32■□□□□ 0.52
NELFA-216ENST00000542778 UTP4Q969X6 686 aaKnown RBP18.32■□□□□ 0.52
NELFA-216ENST00000542778 ARL2BPQ9Y2Y0 163 aa18.32■□□□□ 0.52
NELFA-216ENST00000542778 C2CD2Q9Y426 696 aa18.32■□□□□ 0.52
NELFA-216ENST00000542778 UBAP2Q5T6F2 1119 aaKnown RBP18.31■□□□□ 0.52
NELFA-216ENST00000542778 SV2BQ7L1I2 683 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 ZNF571Q7Z3V5 609 aaPredicted RBP18.31■□□□□ 0.52
NELFA-216ENST00000542778 ERP44Q9BS26 406 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 RNPEPL1Q9HAU8 725 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 RPTORQ8N122 1335 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 FGGP02679 453 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 PDHA1P08559 390 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 ALDH3A1P30838 453 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 PCK1P35558 622 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 PTENP60484 403 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 PRAMEF18Q5VWM3 479 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 ZDHHC24Q6UX98 284 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 GLIS3Q8NEA6 775 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 FBF1Q8TES7 1133 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 PLCD4Q9BRC7 762 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 GANQ9H2C0 597 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 RGL1Q9NZL6 768 aa18.31■□□□□ 0.52
NELFA-216ENST00000542778 CNOT7Q9UIV1 285 aaKnown RBP18.31■□□□□ 0.52
NELFA-216ENST00000542778 E7ENQ6 273 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 CALB2P22676 271 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 SKIV2L2P42285 1042 aaKnown RBP18.3■□□□□ 0.52
NELFA-216ENST00000542778 TECP42680 631 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 PLTPP55058 493 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 DR1Q01658 176 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 LRRC41Q15345 812 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 DYMQ7RTS9 669 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 SPATA21Q7Z572 469 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 CROCCP2Q86T23 111 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 NT5DC3Q86UY8 548 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 EZH1Q92800 747 aaPredicted RBP18.3■□□□□ 0.52
NELFA-216ENST00000542778 RAB3IPQ96QF0 476 aaPredicted RBP18.3■□□□□ 0.52
NELFA-216ENST00000542778 TMEM109Q9BVC6 243 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 CCDC113Q9H0I3 377 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 RIC8AQ9NPQ8 531 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 WDR35Q9P2L0 1181 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 PRKAG3Q9UGI9 489 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 ZBTB21Q9ULJ3 1066 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 TTC7AQ9ULT0 858 aaPredicted RBP18.3■□□□□ 0.52
NELFA-216ENST00000542778 PCDHA1Q9Y5I3 950 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 ESYT2A0FGR8 921 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 RNF8O76064 485 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 SLCO1A2P46721 670 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 GMPSP49915 693 aaPredicted RBP18.3■□□□□ 0.52
NELFA-216ENST00000542778 RASA3Q14644 834 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 LRRC14Q15048 493 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 NUGGCQ68CJ6 796 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 DCAF4Q8WV16 495 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 DYDC1Q8WWB3 177 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 HES6Q96HZ4 224 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 RMDN2Q96LZ7 410 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 TRIM7Q9C029 511 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 STMN4Q9H169 189 aaPredicted RBP18.3■□□□□ 0.52
NELFA-216ENST00000542778 BLOC1S4Q9NUP1 217 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 HERC5Q9UII4 1024 aaKnown RBP18.3■□□□□ 0.52
NELFA-216ENST00000542778 NAGPAQ9UK23 515 aa18.3■□□□□ 0.52
NELFA-216ENST00000542778 PEX11AO75192 247 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 CLK2P49760 499 aaKnown RBP18.29■□□□□ 0.52
NELFA-216ENST00000542778 RAD23BP54727 409 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 AUHQ13825 339 aaKnown RBP18.29■□□□□ 0.52
NELFA-216ENST00000542778 FOXR2Q6PJQ5 311 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 BTNL9Q6UXG8 535 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 TAOK1Q7L7X3 1001 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 IRF2BP2Q7Z5L9 587 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 MICALL2Q8IY33 904 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 SLC17A8Q8NDX2 589 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 FBXO25Q8TCJ0 367 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 UPF1Q92900 1129 aaKnown RBP eCLIP18.29■□□□□ 0.52
NELFA-216ENST00000542778 CALML4Q96GE6 196 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 EPAS1Q99814 870 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 SEMA4AQ9H3S1 761 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 PSTPIP2Q9H939 334 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 DAAM1Q9Y4D1 1078 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 ZNF541Q9H0D2 1346 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 TXKP42681 527 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 ZCWPW2Q504Y3 356 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 RPUSD2Q8IZ73 545 aaKnown RBP18.29■□□□□ 0.52
NELFA-216ENST00000542778 ANKLE1Q8NAG6 615 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 UHMK1Q8TAS1 419 aaKnown RBP18.29■□□□□ 0.52
NELFA-216ENST00000542778 MGARPQ8TDB4 240 aa18.29■□□□□ 0.52
NELFA-216ENST00000542778 COL2A1P02458 1487 aaPredicted RBP18.28■□□□□ 0.52
NELFA-216ENST00000542778 UNC5CO95185 931 aa18.28■□□□□ 0.52
NELFA-216ENST00000542778 PYGLP06737 847 aa18.28■□□□□ 0.52
NELFA-216ENST00000542778 BMP3P12645 472 aa18.28■□□□□ 0.52
NELFA-216ENST00000542778 FKBP3Q00688 224 aaKnown RBP18.28■□□□□ 0.52
NELFA-216ENST00000542778 ALKBH5Q6P6C2 394 aaKnown RBP18.28■□□□□ 0.52
NELFA-216ENST00000542778 MTMR14Q8NCE2 650 aa18.28■□□□□ 0.52
NELFA-216ENST00000542778 GMCL1P1Q8NEA9 526 aa18.28■□□□□ 0.52
NELFA-216ENST00000542778 B4GALNT2Q8NHY0 566 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms