RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CBWD5Q5RIA9 395 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 LRCH2Q5VUJ6 765 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 NAA35Q5VZE5 725 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 C6orf89Q6UWU4 347 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 STXBP4Q6ZWJ1 553 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 HS2ST1Q7LGA3 356 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 TMC3Q7Z5M5 1100 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 DAAM2Q86T65 1068 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 RETREG3Q86VR2 466 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 DDX42Q86XP3 938 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 GLYCTKQ8IVS8 523 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 TPH2Q8IWU9 490 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 C12orf56Q8IXR9 622 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 DAW1Q8N136 415 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 ARFGAP2Q8N6H7 521 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 NLGN2Q8NFZ4 835 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 CCDC26Q8TAB7 109 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 SLC35G2Q8TBE7 412 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 ATP8B4Q8TF62 1192 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 VTI1AQ96AJ9 217 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 NACC1Q96RE7 527 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 WDR11Q9BZH6 1224 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 CARD9Q9H257 536 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 RANBP17Q9H2T7 1088 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 POLD4Q9HCU8 107 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 OSGEPQ9NPF4 335 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 FAM114A2Q9NRY5 505 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 WRAP73Q9P2S5 460 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 APEX2Q9UBZ4 518 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 AMACRQ9UHK6 382 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 AMFRQ9UKV5 643 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 PPP1R9AQ9ULJ8 1098 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 TMX2Q9Y320 296 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 ANKRD62A6NC57 917 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 FAM187AA6NFU0 413 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 SMCHD1A6NHR9 2005 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 TMCO5BA8MYB1 307 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 GCOM1H8Y6P7 765 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 ZBTB39O15060 712 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 PMM2O15305 246 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 P4HA2O15460 535 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 MEFVO15553 781 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 TTI1O43156 1089 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 ECE2O60344 883 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 MTA2O94776 668 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 ERLIN2O94905 339 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 FSBPO95073 299 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 FAM107AO95990 144 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 MYZAPP0CAP1 466 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 POLR2MP0CAP2 368 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 STAT2P52630 851 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 MYL7Q01449 175 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 BFSP1Q12934 665 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 HLTFQ14527 1009 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 CEP55Q53EZ4 464 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 DUPD1Q68J44 220 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 DESI1Q6ICB0 168 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 STYK1Q6J9G0 422 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 C11orf63Q6NUN7 778 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 RUFY4Q6ZNE9 571 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 NLRP14Q86W24 1093 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 SUGP1Q8IWZ8 645 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 FAM178BQ8IXR5 827 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 MYCBPAPQ8TBZ2 947 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 NEK9Q8TD19 979 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 ZNF473Q8WTR7 871 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 CTNNBL1Q8WYA6 563 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 ARHGEF26Q96DR7 871 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 CCT8L2Q96SF2 557 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 RIT2Q99578 217 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 EPB41L4BQ9H329 900 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 UNC45AQ9H3U1 944 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 ZDHHC18Q9NUE0 388 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 HERC5Q9UII4 1024 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 NOVA2Q9UNW9 492 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 COG5Q9UP83 839 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 FRMD4BQ9Y2L6 1034 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 NR2E1Q9Y466 385 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 SAMM50Q9Y512 469 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 CD2APQ9Y5K6 639 aa5.62□□□□□ -1.51
ATPAF1-212ENST00000542495 PFASO15067 1338 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 ZNF536O15090 1300 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 PSME4Q14997 1843 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 RBM47A0AV96 593 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 C5orf60A6NFR6 353 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 GOLGA6L10A6NI86 522 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 FOXN3O00409 490 aaPredicted RBP5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 MAPK13O15264 365 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 TRAPPC3O43617 180 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 GAS7O60861 476 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 FGGP02679 453 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 NUDT17P0C025 328 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 TRIM49P0CI25 452 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 TRIM49CP0CI26 452 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 ARP10275 920 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 BCRP11274 1271 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 YBX3P16989 372 aaKnown RBP eCLIP5.61□□□□□ -1.515e-6■■■□□ 19.1
ATPAF1-212ENST00000542495 VCAM1P19320 739 aa5.61□□□□□ -1.51
ATPAF1-212ENST00000542495 TNFAIP3P21580 790 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms