RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ZNF689Q96CS4 500 aaPredicted RBP21.36■■□□□ 1.01
DDX55-207ENST00000540763 CPB2Q96IY4 423 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 TIGD1Q96MW7 591 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 GBP4Q96PP9 640 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 KIAA1671Q9BY89 1806 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 ZMYM2Q9UBW7 1377 aa21.36■■□□□ 1.01
DDX55-207ENST00000540763 GTPBP6O43824 516 aaPredicted RBP21.35■■□□□ 1.01
DDX55-207ENST00000540763 PPP1R37O75864 691 aa21.35■■□□□ 1.01
DDX55-207ENST00000540763 PIGRP01833 764 aa21.35■■□□□ 1.01
DDX55-207ENST00000540763 ATF7P17544 494 aaPredicted RBP21.35■■□□□ 1.01
DDX55-207ENST00000540763 AFMP43652 599 aa21.35■■□□□ 1.01
DDX55-207ENST00000540763 COASYQ13057 564 aa21.35■■□□□ 1.01
DDX55-207ENST00000540763 SNW1Q13573 536 aaKnown RBP21.35■■□□□ 1.01
DDX55-207ENST00000540763 HERC4Q5GLZ8 1057 aaPredicted RBP21.35■■□□□ 1.01
DDX55-207ENST00000540763 ZPBP2Q6X784 338 aa21.35■■□□□ 1.01
DDX55-207ENST00000540763 ZNF720Q7Z2F6 126 aa21.35■■□□□ 1.01
DDX55-207ENST00000540763 MRPL10Q7Z7H8 261 aaKnown RBP21.35■■□□□ 1.01
DDX55-207ENST00000540763 ADPGKQ9BRR6 497 aa21.35■■□□□ 1.01
DDX55-207ENST00000540763 PDZD7Q9H5P4 517 aa21.35■■□□□ 1.01
DDX55-207ENST00000540763 TNFSF13BQ9Y275 285 aa21.35■■□□□ 1.01
DDX55-207ENST00000540763 UPP2O95045 317 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 EDN1P05305 212 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 RABGGTBP53611 331 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 EHHADHQ08426 723 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 DCAF4L1Q3SXM0 396 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 NT5DC1Q5TFE4 455 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 ATF7IP2Q5U623 682 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 TMCO2Q7Z6W1 182 aaPredicted RBP21.34■■□□□ 1.01
DDX55-207ENST00000540763 MAP4K3Q8IVH8 894 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 ELOA2Q8IYF1 753 aaPredicted RBP21.34■■□□□ 1.01
DDX55-207ENST00000540763 HACE1Q8IYU2 909 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 PGBD4Q96DM1 585 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 YME1L1Q96TA2 773 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 ACO2Q99798 780 aaKnown RBP21.34■■□□□ 1.01
DDX55-207ENST00000540763 STRA6Q9BX79 667 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 MRPL44Q9H9J2 332 aaKnown RBP21.34■■□□□ 1.01
DDX55-207ENST00000540763 TBX20Q9UMR3 447 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 PCDHB2Q9Y5E7 798 aa21.34■■□□□ 1.01
DDX55-207ENST00000540763 TDRD15B5MCY1 1934 aaKnown RBP21.33■■□□□ 1.01
DDX55-207ENST00000540763 CITO14578 2027 aa21.33■■□□□ 1.01
DDX55-207ENST00000540763 LIG1P18858 919 aa21.33■■□□□ 1.01
DDX55-207ENST00000540763 CUL4BQ13620 913 aa21.33■■□□□ 1.01
DDX55-207ENST00000540763 TMEM132AQ24JP5 1023 aa21.33■■□□□ 1.01
DDX55-207ENST00000540763 STXBP4Q6ZWJ1 553 aa21.33■■□□□ 1.01
DDX55-207ENST00000540763 CMTR2Q8IYT2 770 aaKnown RBP21.33■■□□□ 1.01
DDX55-207ENST00000540763 TRIM6Q9C030 488 aaPredicted RBP21.33■■□□□ 1.01
DDX55-207ENST00000540763 YBX2Q9Y2T7 364 aaKnown RBP21.33■■□□□ 1.01
DDX55-207ENST00000540763 TTLL13PA6NNM8 815 aa21.32■■□□□ 1
DDX55-207ENST00000540763 GADD45BO75293 160 aaPredicted RBP21.32■■□□□ 1
DDX55-207ENST00000540763 TOM1L1O75674 476 aa21.32■■□□□ 1
DDX55-207ENST00000540763 PROZP22891 400 aa21.32■■□□□ 1
DDX55-207ENST00000540763 NMT1P30419 496 aaKnown RBP21.32■■□□□ 1
DDX55-207ENST00000540763 PBX2P40425 430 aa21.32■■□□□ 1
DDX55-207ENST00000540763 TPRNQ4KMQ1 711 aa21.32■■□□□ 1
DDX55-207ENST00000540763 FAM117BQ6P1L5 589 aa21.32■■□□□ 1
DDX55-207ENST00000540763 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.32■■□□□ 1
DDX55-207ENST00000540763 GRAMD1CQ8IYS0 662 aa21.32■■□□□ 1
DDX55-207ENST00000540763 TIFAQ96CG3 184 aa21.32■■□□□ 1
DDX55-207ENST00000540763 EIF2AQ9BY44 585 aaKnown RBP21.32■■□□□ 1
DDX55-207ENST00000540763 TMEM117Q9H0C3 514 aa21.32■■□□□ 1
DDX55-207ENST00000540763 BLZF1Q9H2G9 400 aa21.32■■□□□ 1
DDX55-207ENST00000540763 PTPRHQ9HD43 1115 aa21.32■■□□□ 1
DDX55-207ENST00000540763 UBN1Q9NPG3 1134 aa21.32■■□□□ 1
DDX55-207ENST00000540763 HOOK1Q9UJC3 728 aaKnown RBP21.32■■□□□ 1
DDX55-207ENST00000540763 IPPQ9Y573 584 aa21.32■■□□□ 1
DDX55-207ENST00000540763 PCDHB13Q9Y5F0 798 aa21.32■■□□□ 1
DDX55-207ENST00000540763 EIF3DO15371 548 aaKnown RBP eCLIP21.31■■□□□ 1
DDX55-207ENST00000540763 KLRC4O43908 158 aa21.31■■□□□ 1
DDX55-207ENST00000540763 NR1I2O75469 434 aa21.31■■□□□ 1
DDX55-207ENST00000540763 GCNT3O95395 438 aa21.31■■□□□ 1
DDX55-207ENST00000540763 FAM26FQ5R3K3 315 aa21.31■■□□□ 1
DDX55-207ENST00000540763 SMG8Q8ND04 991 aaKnown RBP21.31■■□□□ 1
DDX55-207ENST00000540763 TARS2Q9BW92 718 aaKnown RBP21.31■■□□□ 1
DDX55-207ENST00000540763 RNF19AQ9NV58 838 aa21.31■■□□□ 1
DDX55-207ENST00000540763 UBE4BO95155 1302 aa21.3■■□□□ 1
DDX55-207ENST00000540763 PDCD11Q14690 1871 aaKnown RBP21.3■■□□□ 1
DDX55-207ENST00000540763 UNC80Q8N2C7 3258 aa21.3■■□□□ 1
DDX55-207ENST00000540763 ABLIM1O14639 778 aa21.3■■□□□ 1
DDX55-207ENST00000540763 INPPL1O15357 1258 aa21.3■■□□□ 1
DDX55-207ENST00000540763 KINO60870 393 aaKnown RBP21.3■■□□□ 1
DDX55-207ENST00000540763 PRPF40AO75400 957 aaKnown RBP21.3■■□□□ 1
DDX55-207ENST00000540763 NPTXRO95502 500 aa21.3■■□□□ 1
DDX55-207ENST00000540763 CA3P07451 260 aa21.3■■□□□ 1
DDX55-207ENST00000540763 CASP1P29466 404 aa21.3■■□□□ 1
DDX55-207ENST00000540763 DPYDQ12882 1025 aa21.3■■□□□ 1
DDX55-207ENST00000540763 PSMD2Q13200 908 aa21.3■■□□□ 1
DDX55-207ENST00000540763 POSTNQ15063 836 aa21.3■■□□□ 1
DDX55-207ENST00000540763 L1TD1Q5T7N2 865 aaKnown RBP21.3■■□□□ 1
DDX55-207ENST00000540763 EEF1DP3Q658K8 133 aa21.3■■□□□ 1
DDX55-207ENST00000540763 MPZL3Q6UWV2 235 aa21.3■■□□□ 1
DDX55-207ENST00000540763 ABI1Q8IZP0 508 aa21.3■■□□□ 1
DDX55-207ENST00000540763 CCDC47Q96A33 483 aaKnown RBP21.3■■□□□ 1
DDX55-207ENST00000540763 NKX2-4Q9H2Z4 354 aa21.3■■□□□ 1
DDX55-207ENST00000540763 SLC28A3Q9HAS3 691 aa21.3■■□□□ 1
DDX55-207ENST00000540763 EXOC7Q9UPT5 735 aa21.3■■□□□ 1
DDX55-207ENST00000540763 GOLGA6L22H0YM25 854 aa21.29■■□□□ 1
DDX55-207ENST00000540763 HNRNPDLO14979 420 aaKnown RBP21.29■■□□□ 1
DDX55-207ENST00000540763 MCF2P10911 925 aa21.29■■□□□ 1
DDX55-207ENST00000540763 ITGA4P13612 1032 aa21.29■■□□□ 1
DDX55-207ENST00000540763 MYOGP15173 224 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms