RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 FBXL21Q9UKT6 434 aa6.3□□□□□ -1.4
CHKA-204ENST00000528235 R4GN57 208 aa6.3□□□□□ -1.4
CHKA-204ENST00000528235 MTCL1Q9Y4B5 1905 aaKnown RBP6.3□□□□□ -1.4
CHKA-204ENST00000528235 PATJQ8NI35 1801 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 ABCB11O95342 1321 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 C2CD4DB7Z1M9 353 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 KIF20AO95235 890 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 CFBP00751 764 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 LGALS2P05162 132 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 ASGR2P07307 311 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 RARAP10276 462 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 HSPD1P10809 573 aaKnown RBP6.29□□□□□ -1.4
CHKA-204ENST00000528235 TOP1P11387 765 aaKnown RBP6.29□□□□□ -1.4
CHKA-204ENST00000528235 HOXD8P13378 290 aaPredicted RBP6.29□□□□□ -1.4
CHKA-204ENST00000528235 HOXB8P17481 243 aaPredicted RBP6.29□□□□□ -1.4
CHKA-204ENST00000528235 RBM25P49756 843 aaKnown RBP6.29□□□□□ -1.4
CHKA-204ENST00000528235 OTOGLQ3ZCN5 2332 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 KIAA0319Q5VV43 1072 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 PLPP4Q5VZY2 271 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 RUFY4Q6ZNE9 571 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 KRT25Q7Z3Z0 450 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 WFDC8Q8IUA0 241 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 NPAS4Q8IUM7 802 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 THNSL1Q8IYQ7 743 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 KBTBD3Q8NAB2 608 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 TDRD5Q8NAT2 981 aaKnown RBP6.29□□□□□ -1.4
CHKA-204ENST00000528235 SYTL5Q8TDW5 730 aaPredicted RBP6.29□□□□□ -1.4
CHKA-204ENST00000528235 TTC9Q92623 222 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 PSMG3-AS1Q96PY0 264 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 TMEM47Q9BQJ4 181 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 USP26Q9BXU7 913 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 FTHL17Q9BXU8 183 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 S1PR5Q9H228 398 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 SMOC2Q9H3U7 446 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 ENTPD7Q9NQZ7 604 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 TMEM260Q9NX78 707 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 PUF60Q9UHX1 559 aaKnown RBP6.29□□□□□ -1.4
CHKA-204ENST00000528235 DBR1Q9UK59 544 aaKnown RBP6.29□□□□□ -1.4
CHKA-204ENST00000528235 ZNF215Q9UL58 517 aaPredicted RBP6.29□□□□□ -1.4
CHKA-204ENST00000528235 WDR81Q562E7 1941 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 MYH15Q9Y2K3 1946 aa6.29□□□□□ -1.4
CHKA-204ENST00000528235 M0R2C6 588 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 PI15O43692 258 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 DHX16O60231 1041 aaKnown RBP6.28□□□□□ -1.4
CHKA-204ENST00000528235 FGF18O76093 207 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 MICAL2O94851 1124 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 CHRNA1P02708 482 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 TGFB3P10600 412 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 PDHBP11177 359 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 TARSP26639 723 aaKnown RBP6.28□□□□□ -1.4
CHKA-204ENST00000528235 WEE1P30291 646 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 HOXC8P31273 242 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 MTHFRP42898 656 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 ERVFC1P60507 584 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 GPLD1P80108 840 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 ITIH3Q06033 890 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 ZNF543Q08ER8 600 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 LPIN1Q14693 890 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 FOXD4L6Q3SYB3 417 aaPredicted RBP6.28□□□□□ -1.4
CHKA-204ENST00000528235 RRP12Q5JTH9 1297 aaKnown RBP6.28□□□□□ -1.4
CHKA-204ENST00000528235 PERM1Q5SV97 790 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 CWF19L1Q69YN2 538 aaKnown RBP6.28□□□□□ -1.4
CHKA-204ENST00000528235 SYCE2Q6PIF2 218 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 FOXD4L3Q6VB84 417 aaPredicted RBP6.28□□□□□ -1.4
CHKA-204ENST00000528235 TMEM184AQ6ZMB5 413 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 MTERF4Q7Z6M4 381 aaKnown RBP6.28□□□□□ -1.4
CHKA-204ENST00000528235 DCLK2Q8N568 766 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 VN1R2Q8NFZ6 395 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 RIN2Q8WYP3 895 aaPredicted RBP6.28□□□□□ -1.4
CHKA-204ENST00000528235 CASP10Q92851 521 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 ZNF830Q96NB3 372 aaPredicted RBP6.28□□□□□ -1.4
CHKA-204ENST00000528235 LPIN3Q9BQK8 851 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 POMKQ9H5K3 350 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 EHMT1Q9H9B1 1298 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 PXMP2Q9NR77 195 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 GEMIN8Q9NWZ8 242 aaKnown RBP6.28□□□□□ -1.4
CHKA-204ENST00000528235 COL20A1Q9P218 1284 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 ZFATQ9P243 1243 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 NCDNQ9UBB6 729 aa6.28□□□□□ -1.4
CHKA-204ENST00000528235 MRPL11Q9Y3B7 192 aaKnown RBP6.28□□□□□ -1.4
CHKA-204ENST00000528235 ATRXP46100 2492 aa6.27□□□□□ -1.4
CHKA-204ENST00000528235 NRCAMQ92823 1304 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 CHD8Q9HCK8 2581 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 M0QZ92 97 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 SASH3O75995 380 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 TPM2P07951 284 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 SCG2P13521 617 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 UBA1P22314 1058 aaKnown RBP6.27□□□□□ -1.41
CHKA-204ENST00000528235 CD52P31358 61 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 CA8P35219 290 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 SP2Q02086 613 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 COL9A2Q14055 689 aaPredicted RBP6.27□□□□□ -1.41
CHKA-204ENST00000528235 CDC37Q16543 378 aaPredicted RBP6.27□□□□□ -1.41
CHKA-204ENST00000528235 FBXO47Q5MNV8 452 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 ATAT1Q5SQI0 421 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 GPATCH4Q5T3I0 446 aaKnown RBP6.27□□□□□ -1.41
CHKA-204ENST00000528235 TAF2Q6P1X5 1199 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 IGF2-ASQ6U949 168 aa6.27□□□□□ -1.41
CHKA-204ENST00000528235 TMC7Q7Z402 723 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms