RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 CASP10Q92851 521 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 VN1R3Q9BXE9 311 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 CSRNP2Q9H175 543 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 NXF3Q9H4D5 531 aaKnown RBP10.48□□□□□ -0.73
SF3B2-204ENST00000525207 IRAK3Q9Y616 596 aa10.48□□□□□ -0.73
SF3B2-204ENST00000525207 MYH11P35749 1972 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 A0A087WWV3 80 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 PRR33A8MZF0 331 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 LOC730098B7Z3J9 87 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 CLASP2O75122 1294 aaKnown RBP10.47□□□□□ -0.73
SF3B2-204ENST00000525207 DDHD2O94830 711 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 CD2BP2O95400 341 aaKnown RBP10.47□□□□□ -0.73
SF3B2-204ENST00000525207 ITGA4P13612 1032 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 HOXB8P17481 243 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-204ENST00000525207 CA8P35219 290 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 DSC1Q08554 894 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 CBX2Q14781 532 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-204ENST00000525207 HERC4Q5GLZ8 1057 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-204ENST00000525207 SYCE2Q6PIF2 218 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 MAEAQ7L5Y9 396 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 C4orf32Q8N8J7 132 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 IGSF22Q8N9C0 903 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 BSNDQ8WZ55 320 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 PRIMPOLQ96LW4 560 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 NACC1Q96RE7 527 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 TMEM175Q9BSA9 504 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 PHF7Q9BWX1 381 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-204ENST00000525207 S1PR5Q9H228 398 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 UBN1Q9NPG3 1134 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 MARCH5Q9NX47 278 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 KANSL3Q9P2N6 904 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 MUTYHQ9UIF7 546 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 KIF3AQ9Y496 699 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 HES2Q9Y543 173 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 PCDHB6Q9Y5E3 794 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 MUC6Q6W4X9 2439 aa10.47□□□□□ -0.73
SF3B2-204ENST00000525207 ARHGEF35A5YM69 484 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 ARL5CA6NH57 179 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 POMCP01189 267 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 CYP11B2P19099 503 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 CCT6AP40227 531 aaKnown RBP10.46□□□□□ -0.73
SF3B2-204ENST00000525207 NAMPTP43490 491 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 TOB1P50616 345 aaPredicted RBP10.46□□□□□ -0.73
SF3B2-204ENST00000525207 SCNN1GP51170 649 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 NCBP1Q09161 790 aaKnown RBP10.46□□□□□ -0.73
SF3B2-204ENST00000525207 GIT2Q14161 759 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 BMS1Q14692 1282 aaKnown RBP10.46□□□□□ -0.73
SF3B2-204ENST00000525207 PTPN14Q15678 1187 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 ECM1Q16610 540 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 FAM187BQ17R55 369 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 SLC27A1Q6PCB7 646 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 PADI6Q6TGC4 694 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 CDR2LQ86X02 465 aaPredicted RBP10.46□□□□□ -0.73
SF3B2-204ENST00000525207 RNF135Q8IUD6 432 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 ZBTB8OSQ8IWT0 167 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 COLGALT2Q8IYK4 626 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 HACE1Q8IYU2 909 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 SNX29Q8TEQ0 813 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 AUTS2Q8WXX7 1259 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 TMX3Q96JJ7 454 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 ZFP42Q96MM3 310 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 FAM193BQ96PV7 902 aaPredicted RBP10.46□□□□□ -0.73
SF3B2-204ENST00000525207 GAD1Q99259 594 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 TRIM6Q9C030 488 aaPredicted RBP10.46□□□□□ -0.73
SF3B2-204ENST00000525207 UPF2Q9HAU5 1272 aaKnown RBP10.46□□□□□ -0.73
SF3B2-204ENST00000525207 PRMT7Q9NVM4 692 aaPredicted RBP10.46□□□□□ -0.73
SF3B2-204ENST00000525207 STK39Q9UEW8 545 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 GIT1Q9Y2X7 761 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 HCN4Q9Y3Q4 1203 aa10.46□□□□□ -0.73
SF3B2-204ENST00000525207 TRIP11Q15643 1979 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 KMT2EQ8IZD2 1858 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 A0A1B0GUA9 196 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 LAD1O00515 517 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 NRP1O14786 923 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 NPTXRO95502 500 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 PRPHP41219 470 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 GRIK3Q13003 919 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 PTGDRQ13258 359 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 PPP2R5AQ15172 486 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 TPRNQ4KMQ1 711 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 RNF168Q8IYW5 571 aaPredicted RBP10.45□□□□□ -0.74
SF3B2-204ENST00000525207 TBC1D32Q96NH3 1257 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 HERC2P3Q9BVR0 1158 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 APOL6Q9BWW8 343 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 APOL5Q9BWW9 433 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 RAB34Q9BZG1 259 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 CCDC113Q9H0I3 377 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 C2orf40Q9H1Z8 148 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 BHMT2Q9H2M3 363 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 FZD8Q9H461 694 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.45□□□□□ -0.74
SF3B2-204ENST00000525207 DZANK1Q9NVP4 752 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 LRWD1Q9UFC0 647 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 CDH22Q9UJ99 828 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 PRG3Q9Y2Y8 225 aaPredicted RBP10.45□□□□□ -0.74
SF3B2-204ENST00000525207 VWA8A3KMH1 1905 aa10.45□□□□□ -0.74
SF3B2-204ENST00000525207 PDCD11Q14690 1871 aaKnown RBP10.44□□□□□ -0.74
SF3B2-204ENST00000525207 TTLL13PA6NNM8 815 aa10.44□□□□□ -0.74
SF3B2-204ENST00000525207 N4BP3O15049 544 aa10.44□□□□□ -0.74
SF3B2-204ENST00000525207 CXCL14O95715 111 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms