RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CYP2D7A0A087X1C5 515 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 PHF20L1A8MW92 1017 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 RSPH10B2B2RC85 870 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 PDHXO00330 501 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 SLITRK3O94933 977 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 FBXO21O94952 628 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 INMTO95050 263 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 ECDO95905 644 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-216ENST00000523088 ASNSP08243 561 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 RSPH10BP0C881 870 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 ZSCAN22P10073 491 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-216ENST00000523088 KRT4P19013 534 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 RASA1P20936 1047 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 MUTP22033 750 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 RFX1P22670 979 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 PDE6CP51160 858 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 FCGRTP55899 365 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 SOX10P56693 466 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 OLR1P78380 273 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 CAP1Q01518 475 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 GBE1Q04446 702 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 SULT2A1Q06520 285 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 FAPQ12884 760 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 PDE3AQ14432 1141 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 NAA25Q14CX7 972 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 FBXO43Q4G163 708 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 RNASEH2BQ5TBB1 312 aaKnown RBP8.11□□□□□ -1.11
HDAC3-216ENST00000523088 THEMIS2Q5TEJ8 643 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 NEK5Q6P3R8 708 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 KDELC1Q6UW63 502 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 CENPQQ7L2Z9 268 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-216ENST00000523088 OSTM1Q86WC4 334 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 REXO1L1PQ8IX06 675 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 FAM20CQ8IXL6 584 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 CCDC112Q8NEF3 446 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 NPLOC4Q8TAT6 608 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.11□□□□□ -1.11
HDAC3-216ENST00000523088 NUDT12Q9BQG2 462 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 DBNDD2Q9BQY9 259 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 AIFM2Q9BRQ8 373 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 FOXP3Q9BZS1 431 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 TGIF2Q9GZN2 237 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 R3HDMLQ9H3Y0 253 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 ACAD9Q9H845 621 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.11□□□□□ -1.11
HDAC3-216ENST00000523088 C12orf10Q9HB07 376 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 CAPN10Q9HC96 672 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 ZSWIM6Q9HCJ5 1215 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 AATFQ9NY61 560 aaKnown RBP eCLIP8.11□□□□□ -1.11
HDAC3-216ENST00000523088 EMC3Q9P0I2 261 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 WDR35Q9P2L0 1181 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 CDV3Q9UKY7 258 aaKnown RBP8.11□□□□□ -1.11
HDAC3-216ENST00000523088 KIAA1257Q9ULG3 409 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 PCDHB4Q9Y5E5 795 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 ZHX2Q9Y6X8 837 aa8.11□□□□□ -1.11
HDAC3-216ENST00000523088 LRRD1A4D1F6 860 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 DDTLA6NHG4 134 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 OR6C65A6NJZ3 312 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 A8MVJ9 347 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 RTCAO00442 366 aaKnown RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 SMIM24O75264 130 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 NR1I2O75469 434 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 SMNDC1O75940 238 aaKnown RBP eCLIP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 GFPT2O94808 682 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 DLATP10515 647 aaKnown RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 PRKAR2AP13861 404 aaKnown RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 CD97P48960 835 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 SERPINB8P50452 374 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 ALDH18A1P54886 795 aaKnown RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 NIPAL4Q0D2K0 466 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 AP1B1Q10567 949 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 CETN1Q12798 172 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 C8orf34Q49A92 452 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 TMEM53Q6P2H8 277 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 C17orf99Q6UX52 265 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 SRGAP1Q7Z6B7 1085 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 METTL3Q86U44 580 aaKnown RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 ZNF354CQ86Y25 554 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 MCF2L2Q86YR7 1114 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 FOXP4Q8IVH2 680 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 CEP112Q8N8E3 955 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 KCT2Q8NC54 265 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 NKX2-3Q8TAU0 364 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 GTF3C2Q8WUA4 911 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 IRGQQ8WZA9 623 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 SGK3Q96BR1 496 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 CNDP2Q96KP4 475 aaKnown RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 LPIN3Q9BQK8 851 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 TSEN34Q9BSV6 310 aaKnown RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 CCSER2Q9H7U1 834 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 XAB2Q9HCS7 855 aaKnown RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 DDX4Q9NQI0 724 aaKnown RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 SMYD2Q9NRG4 433 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 GALNT8Q9NY28 637 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 HECAQ9UBI9 543 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 DBNLQ9UJU6 430 aaKnown RBP8.1□□□□□ -1.11
HDAC3-216ENST00000523088 RCAN3Q9UKA8 241 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 TNNQ9UQP3 1299 aa8.1□□□□□ -1.11
HDAC3-216ENST00000523088 CFL2Q9Y281 166 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms