RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 KCNH2Q12809 1159 aa19.83■□□□□ 0.76
SDC2-202ENST00000518385 KCTD2Q14681 263 aa19.83■□□□□ 0.76
SDC2-202ENST00000518385 MEI1Q5TIA1 1274 aa19.83■□□□□ 0.76
SDC2-202ENST00000518385 RUFY4Q6ZNE9 571 aa19.83■□□□□ 0.76
SDC2-202ENST00000518385 PORCNQ9H237 461 aa19.83■□□□□ 0.76
SDC2-202ENST00000518385 TFR2Q9UP52 801 aa19.83■□□□□ 0.76
SDC2-202ENST00000518385 GTPBP10A4D1E9 387 aaKnown RBP19.82■□□□□ 0.76
SDC2-202ENST00000518385 SOWAHBA6NEL2 793 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 SFI1A8K8P3 1242 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 NKRFO15226 690 aaKnown RBP eCLIP19.82■□□□□ 0.761e-7■□□□□ 10.9
SDC2-202ENST00000518385 CCNE2O96020 404 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 PSAPP07602 524 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 PLS3P13797 630 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 NMT1P30419 496 aaKnown RBP19.82■□□□□ 0.76
SDC2-202ENST00000518385 PSMC2P35998 433 aaKnown RBP19.82■□□□□ 0.76
SDC2-202ENST00000518385 ALDH5A1P51649 535 aaPredicted RBP19.82■□□□□ 0.76
SDC2-202ENST00000518385 STXBP2Q15833 593 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 SLC18A3Q16572 532 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 HGSNATQ68CP4 663 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 TSEN2Q8NCE0 465 aaKnown RBP19.82■□□□□ 0.76
SDC2-202ENST00000518385 TAF4BQ92750 862 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 MYCBPQ99417 103 aaPredicted RBP19.82■□□□□ 0.76
SDC2-202ENST00000518385 FAM207AQ9NSI2 230 aaPredicted RBP19.82■□□□□ 0.76
SDC2-202ENST00000518385 RBM12Q9NTZ6 932 aaKnown RBP19.82■□□□□ 0.76
SDC2-202ENST00000518385 DMAC2Q9NW81 257 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 AIPL1Q9NZN9 384 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 KCNG1Q9UIX4 513 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 DAAM1Q9Y4D1 1078 aa19.82■□□□□ 0.76
SDC2-202ENST00000518385 CCDC188H7C350 402 aa19.81■□□□□ 0.76
SDC2-202ENST00000518385 HEXIM1O94992 359 aaKnown RBP19.81■□□□□ 0.76
SDC2-202ENST00000518385 NR1D1P20393 614 aa19.81■□□□□ 0.76
SDC2-202ENST00000518385 CDR1P51861 262 aa19.81■□□□□ 0.76
SDC2-202ENST00000518385 FAM110CQ1W6H9 321 aa19.81■□□□□ 0.76
SDC2-202ENST00000518385 IFNL1Q8IU54 200 aa19.81■□□□□ 0.76
SDC2-202ENST00000518385 DAW1Q8N136 415 aa19.81■□□□□ 0.76
SDC2-202ENST00000518385 HDAC7Q8WUI4 952 aa19.81■□□□□ 0.76
SDC2-202ENST00000518385 CABS1Q96KC9 395 aa19.81■□□□□ 0.76
SDC2-202ENST00000518385 ISCUQ9H1K1 167 aa19.81■□□□□ 0.76
SDC2-202ENST00000518385 C17orf75Q9HAS0 396 aa19.81■□□□□ 0.76
SDC2-202ENST00000518385 ZMYM2Q9UBW7 1377 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 AKAP3O75969 853 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 RGS20O76081 388 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 PLEKP08567 350 aaPredicted RBP19.8■□□□□ 0.76
SDC2-202ENST00000518385 EDNRBP24530 442 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 LSP1P33241 339 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 ABCD1P33897 745 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 MDH1P40925 334 aaKnown RBP19.8■□□□□ 0.76
SDC2-202ENST00000518385 NAP1L1P55209 391 aaKnown RBP19.8■□□□□ 0.76
SDC2-202ENST00000518385 CLUL1Q15846 466 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 PPP2R5EQ16537 467 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 AGBL2Q5U5Z8 902 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 WDR78Q5VTH9 848 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 CCDC50Q8IVM0 306 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 C12orf56Q8IXR9 622 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 ARL8AQ96BM9 186 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 HVCN1Q96D96 273 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 MPHOSPH6Q99547 160 aaKnown RBP19.8■□□□□ 0.76
SDC2-202ENST00000518385 JPH1Q9HDC5 661 aaPredicted RBP19.8■□□□□ 0.76
SDC2-202ENST00000518385 TMEM59LQ9UK28 342 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 FBXL5Q9UKA1 691 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 MYH11P35749 1972 aa19.8■□□□□ 0.76
SDC2-202ENST00000518385 ADGRA2Q96PE1 1338 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 BHMG1C9JSJ3 638 aaPredicted RBP19.79■□□□□ 0.76
SDC2-202ENST00000518385 STRNO43815 780 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 FAM107AO95990 144 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 PGK2P07205 417 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 TM4SF4P48230 202 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 SREBF2Q12772 1141 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 PPP2R5AQ15172 486 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 PTGISQ16647 500 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 TDRD12Q587J7 1177 aaKnown RBP19.79■□□□□ 0.76
SDC2-202ENST00000518385 ABRAQ8N0Z2 381 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 ACTRT1Q8TDG2 376 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 LMBR1Q8WVP7 490 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 BORCS6Q96GS4 357 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 GDAP1L1Q96MZ0 367 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 ACCSQ96QU6 501 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 SLC9A2Q9UBY0 812 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 INTUQ9ULD6 942 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 FRMD4BQ9Y2L6 1034 aa19.79■□□□□ 0.76
SDC2-202ENST00000518385 ZNFX1Q9P2E3 1918 aaKnown RBP19.79■□□□□ 0.76
SDC2-202ENST00000518385 GFPT2O94808 682 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 SCP2P22307 547 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 HNRNPH1P31943 449 aaKnown RBP19.78■□□□□ 0.76
SDC2-202ENST00000518385 LIG3P49916 1009 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 PDE4CQ08493 712 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 TAF1CQ15572 869 aaPredicted RBP19.78■□□□□ 0.76
SDC2-202ENST00000518385 MIS18BP1Q6P0N0 1132 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 FGD4Q96M96 766 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 LSM14BQ9BX40 385 aaKnown RBP19.78■□□□□ 0.76
SDC2-202ENST00000518385 EPB41L5Q9HCM4 733 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 AGPAT3Q9NRZ7 376 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 LOC102724159A0A0B4J2E5 919 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 GOLGA6L7A0A1B0GV03 622 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 MAPK13O15264 365 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 SMTNP53814 917 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 RTP1P59025 263 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 GTF2BQ00403 316 aa19.78■□□□□ 0.76
SDC2-202ENST00000518385 PWP2Q15269 919 aaKnown RBP19.78■□□□□ 0.76
SDC2-202ENST00000518385 ZC2HC1CQ53FD0 456 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms