RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 TARS2Q9BW92 718 aaKnown RBP15.87■□□□□ 0.13
USP11-212ENST00000497179 COLQQ9Y215 455 aaPredicted RBP15.87■□□□□ 0.13
USP11-212ENST00000497179 TNFSF13BQ9Y275 285 aa15.87■□□□□ 0.13
USP11-212ENST00000497179 USP20Q9Y2K6 914 aa15.87■□□□□ 0.13
USP11-212ENST00000497179 UBE4BO95155 1302 aa15.87■□□□□ 0.13
USP11-212ENST00000497179 A0A0U1RQF3 1178 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 ZNF623O75123 536 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 SKIP12755 728 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 TMEM132AQ24JP5 1023 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 EEF1DP3Q658K8 133 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 CDR2LQ86X02 465 aaPredicted RBP15.86■□□□□ 0.13
USP11-212ENST00000497179 ECHDC2Q86YB7 292 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 NPAS4Q8IUM7 802 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 MYOCDQ8IZQ8 938 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 CRIPAKQ8N1N5 446 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 SMARCE1Q969G3 411 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 GSDMAQ96QA5 445 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 CLSTN2Q9H4D0 955 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 ELAC1Q9H777 363 aaKnown RBP15.86■□□□□ 0.13
USP11-212ENST00000497179 PTPRHQ9HD43 1115 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 FAM105AQ9NUU6 356 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
USP11-212ENST00000497179 RMND1Q9NWS8 449 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 PCDHA5Q9Y5H7 936 aa15.86■□□□□ 0.13
USP11-212ENST00000497179 ABLIM1O14639 778 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 TOM1L1O75674 476 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 ATP2A2P16615 1042 aaKnown RBP15.85■□□□□ 0.13
USP11-212ENST00000497179 ATF7P17544 494 aaPredicted RBP15.85■□□□□ 0.13
USP11-212ENST00000497179 PROZP22891 400 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 STK4Q13043 487 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 BMT2Q1RMZ1 405 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 DCAF4L1Q3SXM0 396 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 ZNF598Q86UK7 904 aaKnown RBP15.85■□□□□ 0.13
USP11-212ENST00000497179 HERC6Q8IVU3 1022 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 KIAA0895Q8NCT3 520 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 ZNF507Q8TCN5 953 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 TOP1MTQ969P6 601 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 BICD1Q96G01 975 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 ACCSQ96QU6 501 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 EIF2AQ9BY44 585 aaKnown RBP15.85■□□□□ 0.13
USP11-212ENST00000497179 SLC39A2Q9NP94 309 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 TMEM161AQ9NX61 479 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 PCDHB2Q9Y5E7 798 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 COL4A6Q14031 1691 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 ZMYM2Q9UBW7 1377 aa15.85■□□□□ 0.13
USP11-212ENST00000497179 TTC3P53804 2025 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 CHD9Q3L8U1 2897 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 HNRNPDLO14979 420 aaKnown RBP15.84■□□□□ 0.13
USP11-212ENST00000497179 PRPF6O94906 941 aaKnown RBP15.84■□□□□ 0.13
USP11-212ENST00000497179 NPTXRO95502 500 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 STAG3L1P0CL83 205 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 LIG4P49917 911 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 KCNA1Q09470 495 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 SLC39A4Q6P5W5 647 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 MPZL3Q6UWV2 235 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 APBB1IPQ7Z5R6 666 aaPredicted RBP15.84■□□□□ 0.13
USP11-212ENST00000497179 MRPL10Q7Z7H8 261 aaKnown RBP15.84■□□□□ 0.13
USP11-212ENST00000497179 SCFD1Q8WVM8 642 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 ERCC4Q92889 916 aaPredicted RBP15.84■□□□□ 0.13
USP11-212ENST00000497179 ADPGKQ9BRR6 497 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 NUP62CLQ9H1M0 184 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 CDT1Q9H211 546 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 TMEM206Q9H813 350 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 EXOC7Q9UPT5 735 aa15.84■□□□□ 0.13
USP11-212ENST00000497179 GJB5O95377 273 aa15.83■□□□□ 0.12
USP11-212ENST00000497179 EOMESO95936 686 aa15.83■□□□□ 0.12
USP11-212ENST00000497179 MCF2P10911 925 aa15.83■□□□□ 0.12
USP11-212ENST00000497179 PTMSP20962 102 aa15.83■□□□□ 0.12
USP11-212ENST00000497179 HOXD13P35453 343 aa15.83■□□□□ 0.12
USP11-212ENST00000497179 CAMK4Q16566 473 aa15.83■□□□□ 0.12
USP11-212ENST00000497179 ZNF568Q3ZCX4 644 aa15.83■□□□□ 0.12
USP11-212ENST00000497179 FAM109BQ6ICB4 259 aaPredicted RBP15.83■□□□□ 0.12
USP11-212ENST00000497179 TMCO2Q7Z6W1 182 aaPredicted RBP15.83■□□□□ 0.12
USP11-212ENST00000497179 SMG8Q8ND04 991 aaKnown RBP15.83■□□□□ 0.12
USP11-212ENST00000497179 GTPBP4Q9BZE4 634 aaKnown RBP15.83■□□□□ 0.12
USP11-212ENST00000497179 TRIM6Q9C030 488 aaPredicted RBP15.83■□□□□ 0.12
USP11-212ENST00000497179 RC3H2Q9HBD1 1191 aaKnown RBP15.83■□□□□ 0.12
USP11-212ENST00000497179 ANKFY1Q9P2R3 1169 aa15.83■□□□□ 0.12
USP11-212ENST00000497179 LRFN2Q9ULH4 789 aa15.83■□□□□ 0.12
USP11-212ENST00000497179 IPPQ9Y573 584 aa15.83■□□□□ 0.12
USP11-212ENST00000497179 PCDHB7Q9Y5E2 793 aa15.83■□□□□ 0.12
USP11-212ENST00000497179 ANKRD63C9JTQ0 380 aa15.82■□□□□ 0.12
USP11-212ENST00000497179 HOXA2O43364 376 aa15.82■□□□□ 0.12
USP11-212ENST00000497179 UPP2O95045 317 aa15.82■□□□□ 0.12
USP11-212ENST00000497179 IBSPP21815 317 aaPredicted RBP15.82■□□□□ 0.12
USP11-212ENST00000497179 HTRA4P83105 476 aaPredicted RBP15.82■□□□□ 0.12
USP11-212ENST00000497179 MCL1Q07820 350 aa15.82■□□□□ 0.12
USP11-212ENST00000497179 NOLC1Q14978 699 aaKnown RBP eCLIP15.82■□□□□ 0.12
USP11-212ENST00000497179 LRIT3Q3SXY7 679 aa15.82■□□□□ 0.12
USP11-212ENST00000497179 ZNF658Q5TYW1 1059 aaPredicted RBP15.82■□□□□ 0.12
USP11-212ENST00000497179 HACE1Q8IYU2 909 aa15.82■□□□□ 0.12
USP11-212ENST00000497179 SYCP3Q8IZU3 236 aa15.82■□□□□ 0.12
USP11-212ENST00000497179 PGBD4Q96DM1 585 aa15.82■□□□□ 0.12
USP11-212ENST00000497179 ZBTB45Q96K62 511 aaPredicted RBP15.82■□□□□ 0.12
USP11-212ENST00000497179 TCHPQ9BT92 498 aa15.82■□□□□ 0.12
USP11-212ENST00000497179 HAPLN2Q9GZV7 340 aa15.82■□□□□ 0.12
USP11-212ENST00000497179 IKZF4Q9H2S9 585 aa15.82■□□□□ 0.12
USP11-212ENST00000497179 NXF3Q9H4D5 531 aaKnown RBP15.82■□□□□ 0.12
USP11-212ENST00000497179 RNF19AQ9NV58 838 aa15.82■□□□□ 0.12
USP11-212ENST00000497179 KIAA1468Q9P260 1216 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms