RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 TMTC1Q8IUR5 882 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 AGAP1Q9UPQ3 857 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 COL11A2P13942 1736 aaPredicted RBP10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 EMSYQ7Z589 1322 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 ATP1A3P13637 1013 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 SCP2P22307 547 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 PTPN18Q99952 460 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 TSGA10Q9BZW7 698 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 SLC38A7Q9NVC3 462 aa10.22□□□□□ -0.77
GAPVD1-219ENST00000495955 TRAPPC3O43617 180 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 GFPT2O94808 682 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 MAGEA1P43355 309 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 CLK2P49760 499 aaKnown RBP10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 AP3M2P53677 418 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 TMEM119Q4V9L6 283 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 TNFRSF25Q93038 417 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 MAK16Q9BXY0 300 aaKnown RBP10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 DAPK3O43293 454 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 MED7O43513 233 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 CCNE2O96020 404 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 ICAM3P32942 547 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 NSFP46459 744 aaKnown RBP10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 CACNB2Q08289 660 aaPredicted RBP10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 SLC35G1Q2M3R5 365 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 ZNF792Q3KQV3 632 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 GLRA4Q5JXX5 417 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 C17orf99Q6UX52 265 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 RPUSD2Q8IZ73 545 aaKnown RBP10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 ADSSL1Q8N142 457 aa10.21□□□□□ -0.77
GAPVD1-219ENST00000495955 WNT7AO00755 349 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 EXTL3O43909 919 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 HSPA1AP0DMV8 641 aaKnown RBP10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 HSPA1BP0DMV9 641 aaKnown RBP10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 CPB1P15086 417 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 MPZL3Q6UWV2 235 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 TMEM199Q8N511 208 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 KIF18AQ8NI77 898 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 ZIC5Q96T25 663 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 KBTBD4Q9NVX7 518 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 CDY2AQ9Y6F7 541 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 SYNJ2BP-COX16A0A087WUM0 186 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 IL18RAPO95256 599 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 CLTAP09496 248 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 FERP16591 822 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 CASP14P31944 242 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 ABHD15Q6UXT9 468 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 ZNF410Q86VK4 478 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 HHIPL1Q96JK4 782 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 RUFY1Q96T51 708 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 MIS12Q9H081 205 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 COX16Q9P0S2 106 aa10.21□□□□□ -0.78
GAPVD1-219ENST00000495955 RASSF10A6NK89 507 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 POLR2BP30876 1174 aaKnown RBP10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 ACTN2P35609 894 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 ALDH7A1P49419 539 aaKnown RBP10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 RSRC2Q7L4I2 434 aaKnown RBP10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 KCNK18Q7Z418 384 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 PRG3Q9Y2Y8 225 aaPredicted RBP10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 MRPS6P82932 125 aaKnown RBP10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 SCN4BQ8IWT1 228 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 RNPEPQ9H4A4 650 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 LRRC4Q9HBW1 653 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 RBP5P82980 135 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 FRMD5Q7Z6J6 570 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 FAM149B1Q96BN6 582 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 SLC16A3O15427 465 aaKnown RBP10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 CD4P01730 458 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 PLCB3Q01970 1234 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 IL17AQ16552 155 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 WDR72Q3MJ13 1102 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 SELENOOQ9BVL4 669 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 DNAJC12Q9UKB3 198 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 VAV3Q9UKW4 847 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 HPSEQ9Y251 543 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 A8MXQ7 604 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 ESPNB1AK53 854 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 HOXA2O43364 376 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 SLC12A3P55017 1021 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 SCYL2Q6P3W7 929 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 TMEM270Q6UE05 265 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 ZNF720Q7Z2F6 126 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 ELMOD1Q8N336 334 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 NME8Q8N427 588 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 ENGASEQ8NFI3 743 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 CCDC51Q96ER9 411 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 GCNAQ96QF7 691 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 INTS2Q9H0H0 1204 aaKnown RBP10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 AAASQ9NRG9 546 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 ARGLU1Q9NWB6 273 aaPredicted RBP10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 SNX9Q9Y5X1 595 aa10.2□□□□□ -0.78
GAPVD1-219ENST00000495955 ANKRD31Q8N7Z5 1873 aa10.19□□□□□ -0.78
GAPVD1-219ENST00000495955 MOXD2PA6NHM9 499 aa10.19□□□□□ -0.78
GAPVD1-219ENST00000495955 TOM1L1O75674 476 aa10.19□□□□□ -0.78
GAPVD1-219ENST00000495955 AMHP03971 560 aa10.19□□□□□ -0.78
GAPVD1-219ENST00000495955 SNRPFP62306 86 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-219ENST00000495955 RBL2Q08999 1139 aa10.19□□□□□ -0.78
GAPVD1-219ENST00000495955 PKN2Q16513 984 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-219ENST00000495955 SIX6OS1Q8N1H7 587 aa10.19□□□□□ -0.78
GAPVD1-219ENST00000495955 FBXL13Q8NEE6 735 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms