RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 VPS72Q15906 364 aa4.72□□□□□ -1.65
VPS36-205ENST00000492650 SEPT7Q16181 437 aaKnown RBP4.72□□□□□ -1.65
VPS36-205ENST00000492650 PCSK4Q6UW60 755 aa4.72□□□□□ -1.65
VPS36-205ENST00000492650 FRMD7Q6ZUT3 714 aa4.72□□□□□ -1.65
VPS36-205ENST00000492650 CXorf67Q86X51 503 aaPredicted RBP4.72□□□□□ -1.65
VPS36-205ENST00000492650 XYLT1Q86Y38 959 aa4.72□□□□□ -1.65
VPS36-205ENST00000492650 MSL3Q8N5Y2 521 aaKnown RBP4.72□□□□□ -1.65
VPS36-205ENST00000492650 PDCD2LQ9BRP1 358 aa4.72□□□□□ -1.65
VPS36-205ENST00000492650 TARS2Q9BW92 718 aaKnown RBP4.72□□□□□ -1.65
VPS36-205ENST00000492650 CPEB1Q9BZB8 566 aaKnown RBP4.72□□□□□ -1.65
VPS36-205ENST00000492650 SPON1Q9HCB6 807 aa4.72□□□□□ -1.65
VPS36-205ENST00000492650 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS36-205ENST00000492650 NUMBLQ9Y6R0 609 aa4.72□□□□□ -1.65
VPS36-205ENST00000492650 TRIM24O15164 1050 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 PRAMEF4O60810 478 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 CDC45O75419 566 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 RHOBTB3O94955 611 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 FKBP9O95302 570 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 CLEC2LP0C7M8 214 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 LAG3P18627 525 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 LSSP48449 732 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 PTTG1IPP53801 180 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 WNT3AP56704 352 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 UBE3CQ15386 1083 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 TERF2Q15554 542 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 CCDC178Q5BJE1 867 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 METTL24Q5JXM2 366 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 IQSEC1Q6DN90 963 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 LRRC55Q6ZSA7 311 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 FKBP9P1Q75LS8 142 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 RHOUQ7L0Q8 258 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 ZNF575Q86XF7 245 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 GLB1L2Q8IW92 636 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 FAM177A1Q8N128 213 aaPredicted RBP4.71□□□□□ -1.66
VPS36-205ENST00000492650 OR52N2Q8NGI0 321 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 NDC1Q9BTX1 674 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 LSM14BQ9BX40 385 aaKnown RBP4.71□□□□□ -1.66
VPS36-205ENST00000492650 CHMP4AQ9BY43 222 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 KCNH6Q9H252 994 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 ZNF768Q9H5H4 540 aaKnown RBP4.71□□□□□ -1.66
VPS36-205ENST00000492650 PPP2R3BQ9Y5P8 575 aa4.71□□□□□ -1.66
VPS36-205ENST00000492650 A0A1W2PR48 441 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 PRR5-ARHGAP8B1AHC4 643 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 KDM1AO60341 852 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 APOBEC3AP31941 199 aaPredicted RBP4.7□□□□□ -1.66
VPS36-205ENST00000492650 ADCYAP1R1P41586 468 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 DDB1Q16531 1140 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 PLEKHG4Q58EX7 1191 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 BROXQ5VW32 411 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 CCDC62Q6P9F0 684 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 DOK3Q7L591 496 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 GPR150Q8NGU9 434 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 LEO1Q8WVC0 666 aaPredicted RBP4.7□□□□□ -1.66
VPS36-205ENST00000492650 MFSD3Q96ES6 412 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 CDC5LQ99459 802 aaKnown RBP4.7□□□□□ -1.66
VPS36-205ENST00000492650 TRPM5Q9NZQ8 1165 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 EVLQ9UI08 416 aaPredicted RBP4.7□□□□□ -1.66
VPS36-205ENST00000492650 PRSS50Q9UI38 385 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 CLCA2Q9UQC9 943 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 PLAAQ9Y263 795 aa4.7□□□□□ -1.66
VPS36-205ENST00000492650 NOC2LQ9Y3T9 749 aaKnown RBP4.7□□□□□ -1.66
VPS36-205ENST00000492650 AHRRA9YTQ3 701 aa4.69□□□□□ -1.66
VPS36-205ENST00000492650 MANFP55145 182 aaKnown RBP4.69□□□□□ -1.66
VPS36-205ENST00000492650 APBA1Q02410 837 aa4.69□□□□□ -1.66
VPS36-205ENST00000492650 DALRD3Q5D0E6 543 aaKnown RBP4.69□□□□□ -1.66
VPS36-205ENST00000492650 OR14C36Q8NHC7 312 aa4.69□□□□□ -1.66
VPS36-205ENST00000492650 RSAD2Q8WXG1 361 aa4.69□□□□□ -1.66
VPS36-205ENST00000492650 DCLRE1CQ96SD1 692 aaKnown RBP4.69□□□□□ -1.66
VPS36-205ENST00000492650 FEZ1Q99689 392 aa4.69□□□□□ -1.66
VPS36-205ENST00000492650 SLC46A2Q9BY10 475 aa4.69□□□□□ -1.66
VPS36-205ENST00000492650 CYP4F11Q9HBI6 524 aa4.69□□□□□ -1.66
VPS36-205ENST00000492650 PACSIN3Q9UKS6 424 aa4.69□□□□□ -1.66
VPS36-205ENST00000492650 TMPRSS11EQ9UL52 423 aa4.69□□□□□ -1.66
VPS36-205ENST00000492650 MRPL42Q9Y6G3 142 aaKnown RBP4.69□□□□□ -1.66
VPS36-205ENST00000492650 ZMYM3Q14202 1370 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 COL4A3Q01955 1670 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 B3GALT2O43825 422 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 LTA4HP09960 611 aaKnown RBP4.68□□□□□ -1.66
VPS36-205ENST00000492650 TGM1P22735 817 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 FAM189BP81408 668 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 COL10A1Q03692 680 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 KRTAP1-1Q07627 177 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 TRIM25Q14258 630 aaKnown RBP4.68□□□□□ -1.66
VPS36-205ENST00000492650 ATP13A4Q4VNC1 1196 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 DPY19L2P1Q6NXN4 242 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 GDF7Q7Z4P5 450 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 WNT8AQ9H1J5 351 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 EMC7Q9NPA0 242 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 POGKQ9P215 609 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 HS3ST4Q9Y661 456 aa4.68□□□□□ -1.66
VPS36-205ENST00000492650 LEFTY2O00292 366 aa4.67□□□□□ -1.66
VPS36-205ENST00000492650 RNASET2O00584 256 aaKnown RBP4.67□□□□□ -1.66
VPS36-205ENST00000492650 LPXNO60711 386 aa4.67□□□□□ -1.66
VPS36-205ENST00000492650 NCR1O76036 304 aa4.67□□□□□ -1.66
VPS36-205ENST00000492650 NUDT3O95989 172 aa4.67□□□□□ -1.66
VPS36-205ENST00000492650 LPLP06858 475 aa4.67□□□□□ -1.66
VPS36-205ENST00000492650 PROZP22891 400 aa4.67□□□□□ -1.66
VPS36-205ENST00000492650 LGALS4P56470 323 aa4.67□□□□□ -1.66
VPS36-205ENST00000492650 RNASE9P60153 205 aaKnown RBP4.67□□□□□ -1.66
VPS36-205ENST00000492650 NHLH2Q02577 135 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms