RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 SLC11A1P49279 550 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 NPEPPSP55786 919 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 MTMR3Q13615 1198 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 EMC2Q15006 297 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 PTPN14Q15678 1187 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 LONRF3Q496Y0 759 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 RARS2Q5T160 578 aaKnown RBP9.54□□□□□ -0.88
PRKCB-208ENST00000487674 KIAA1841Q6NSI8 718 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 SRGAP1Q7Z6B7 1085 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 C4orf19Q8IY42 314 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 UBALD2Q8IYN6 164 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 TDRD5Q8NAT2 981 aaKnown RBP9.54□□□□□ -0.88
PRKCB-208ENST00000487674 TMEM87AQ8NBN3 555 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 KREMEN2Q8NCW0 462 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 TCP11Q8WWU5 503 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 PRPF31Q8WWY3 499 aaKnown RBP9.54□□□□□ -0.88
PRKCB-208ENST00000487674 AUTS2Q8WXX7 1259 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 CEP170P1Q96L14 293 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 GBP3Q9H0R5 595 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 RSAD1Q9HA92 442 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 WRAP73Q9P2S5 460 aaPredicted RBP9.54□□□□□ -0.88
PRKCB-208ENST00000487674 DNAJB4Q9UDY4 337 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 SORCS3Q9UPU3 1222 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 WDFY4Q6ZS81 3184 aa9.54□□□□□ -0.88
PRKCB-208ENST00000487674 C2CD4DB7Z1M9 353 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 B4GALT3O60512 393 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 PFKFB2O60825 505 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 EPCAMP16422 314 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 YWHABP31946 246 aaKnown RBP9.53□□□□□ -0.88
PRKCB-208ENST00000487674 VCPP55072 806 aaKnown RBP9.53□□□□□ -0.88
PRKCB-208ENST00000487674 SPIRE1Q08AE8 756 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 LAMTOR4Q0VGL1 99 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 TCF15Q12870 199 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 PCBP1Q15365 356 aaKnown RBP eCLIP9.53□□□□□ -0.88
PRKCB-208ENST00000487674 EPHA7Q15375 998 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 AGMOQ6ZNB7 445 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 PIK3AP1Q6ZUJ8 805 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 OTUD6AQ7L8S5 288 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 MRPL10Q7Z7H8 261 aaKnown RBP9.53□□□□□ -0.88
PRKCB-208ENST00000487674 FERMT3Q86UX7 667 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 CABP7Q86V35 215 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 PPFIBP1Q86W92 1011 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 ZNF280BQ86YH2 543 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 SLFN12Q8IYM2 578 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 SLC22A17Q8WUG5 538 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 WASF1Q92558 559 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 HAS1Q92839 578 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 TMEM143Q96AN5 459 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 TMEM175Q9BSA9 504 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 VN1R3Q9BXE9 311 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 ZSWIM4Q9H7M6 989 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 MINDY3Q9H8M7 445 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 SFXN1Q9H9B4 322 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 KANSL3Q9P2N6 904 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 USTQ9Y2C2 406 aa9.53□□□□□ -0.88
PRKCB-208ENST00000487674 C2orf16Q68DN1 1984 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 ASAP2O43150 1006 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 MARCH6O60337 910 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 ERLIN2O94905 339 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 WEE2P0C1S8 567 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 SRGAP2CP0DJJ0 459 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 NCLP19338 710 aaKnown RBP9.52□□□□□ -0.89
PRKCB-208ENST00000487674 AVPR2P30518 371 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 HOXA11P31270 313 aaPredicted RBP9.52□□□□□ -0.89
PRKCB-208ENST00000487674 CYP4A11Q02928 519 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 XKR9Q5GH70 373 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 ATAT1Q5SQI0 421 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 UBXN11Q5T124 520 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 NCAPH2Q6IBW4 605 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 ZDHHC14Q8IZN3 488 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 C12orf76Q8N812 135 aaPredicted RBP9.52□□□□□ -0.89
PRKCB-208ENST00000487674 RNF149Q8NC42 400 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 CNNM3Q8NE01 707 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 ANKK1Q8NFD2 765 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 CCDC51Q96ER9 411 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 FAM193BQ96PV7 902 aaPredicted RBP9.52□□□□□ -0.89
PRKCB-208ENST00000487674 MTRQ99707 1265 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 EMILIN2Q9BXX0 1053 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 IRF2BPLQ9H1B7 796 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 BRMS1Q9HCU9 246 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 UBN1Q9NPG3 1134 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 GJB4Q9NTQ9 266 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 RGL1Q9NZL6 768 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 DBR1Q9UK59 544 aaKnown RBP9.52□□□□□ -0.89
PRKCB-208ENST00000487674 TPCN1Q9ULQ1 816 aa9.52□□□□□ -0.89
PRKCB-208ENST00000487674 MYO10Q9HD67 2058 aa9.51□□□□□ -0.89
PRKCB-208ENST00000487674 TDRD15B5MCY1 1934 aaKnown RBP9.51□□□□□ -0.89
PRKCB-208ENST00000487674 INPPL1O15357 1258 aa9.51□□□□□ -0.89
PRKCB-208ENST00000487674 TSPAN1O60635 241 aa9.51□□□□□ -0.89
PRKCB-208ENST00000487674 DDHD2O94830 711 aa9.51□□□□□ -0.89
PRKCB-208ENST00000487674 LYPLA2O95372 231 aa9.51□□□□□ -0.89
PRKCB-208ENST00000487674 BAG4O95429 457 aaKnown RBP9.51□□□□□ -0.89
PRKCB-208ENST00000487674 CTDNEP1O95476 244 aa9.51□□□□□ -0.89
PRKCB-208ENST00000487674 BRD1O95696 1058 aa9.51□□□□□ -0.89
PRKCB-208ENST00000487674 PDGFBP01127 241 aaPredicted RBP9.51□□□□□ -0.89
PRKCB-208ENST00000487674 POMCP01189 267 aa9.51□□□□□ -0.89
PRKCB-208ENST00000487674 URODP06132 367 aa9.51□□□□□ -0.89
PRKCB-208ENST00000487674 AXLP30530 894 aa9.51□□□□□ -0.89
PRKCB-208ENST00000487674 KRT2P35908 639 aa9.51□□□□□ -0.89
PRKCB-208ENST00000487674 CLCN4P51793 760 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms