RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 PRAMEF4O60810 478 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 ZNF888P0CJ79 500 aaPredicted RBP7.59□□□□□ -1.19
VPS50-212ENST00000476413 ADSLP30566 484 aaPredicted RBP7.59□□□□□ -1.19
VPS50-212ENST00000476413 CSF2RBP32927 897 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 NEK3P51956 506 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 TARDBPQ13148 414 aaKnown RBP eCLIP7.59□□□□□ -1.19
VPS50-212ENST00000476413 SAFBQ15424 915 aaKnown RBP eCLIP7.59□□□□□ -1.19
VPS50-212ENST00000476413 SWSAP1Q6NVH7 229 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 NPNTQ6UXI9 565 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 SYDE1Q6ZW31 735 aaPredicted RBP7.59□□□□□ -1.19
VPS50-212ENST00000476413 COL23A1Q86Y22 540 aaPredicted RBP7.59□□□□□ -1.19
VPS50-212ENST00000476413 REXO1L1PQ8IX06 675 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 GFM2Q969S9 779 aaKnown RBP7.59□□□□□ -1.19
VPS50-212ENST00000476413 C7orf25Q9BPX7 421 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 KRTAP4-8Q9BYQ9 185 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 FAM204AQ9H8W3 233 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 L2HGDHQ9H9P8 463 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.59□□□□□ -1.19
VPS50-212ENST00000476413 TRPS1Q9UHF7 1281 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 L1RE1Q9UN81 338 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 FAM50BQ9Y247 325 aa7.59□□□□□ -1.19
VPS50-212ENST00000476413 LRRC14BA6NHZ5 514 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 FFAR3O14843 346 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 PHF2O75151 1096 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 SLC5A1P13866 664 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 HTR1BP28222 390 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 MRE11P49959 708 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 BIRC2Q13490 618 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 HDAC1Q13547 482 aaPredicted RBP7.58□□□□□ -1.2
VPS50-212ENST00000476413 RHOT1Q8IXI2 618 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 SAMD3Q8N6K7 520 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 PLBD2Q8NHP8 589 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 RAB24Q969Q5 203 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 RGMAQ96B86 450 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 MBD6Q96DN6 1003 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 MRGPRX4Q96LA9 322 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 UIMC1Q96RL1 719 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 PDCD2LQ9BRP1 358 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 TLR9Q9NR96 1032 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 ING3Q9NXR8 418 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 USP25Q9UHP3 1055 aa7.58□□□□□ -1.2
VPS50-212ENST00000476413 A0A1B0GTL3 188 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 WNT10BO00744 389 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 PMM2O15305 246 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 TPD52L2O43399 206 aaKnown RBP7.57□□□□□ -1.2
VPS50-212ENST00000476413 ALDH1A2O94788 518 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 ENDOD1O94919 500 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 AMY1AP04745 511 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 ECHS1P30084 290 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 SREBF1P36956 1147 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 SESN2P58004 480 aaPredicted RBP7.57□□□□□ -1.2
VPS50-212ENST00000476413 ADAM8P78325 824 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 CDC42EP1Q00587 391 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 ANO6Q4KMQ2 910 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 ATG14Q6ZNE5 492 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 RTKN2Q8IZC4 609 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 ADGRG2Q8IZP9 1017 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 ZGPATQ8N5A5 531 aaKnown RBP7.57□□□□□ -1.2
VPS50-212ENST00000476413 PLA2G15Q8NCC3 412 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 DACT3Q96B18 629 aaPredicted RBP7.57□□□□□ -1.2
VPS50-212ENST00000476413 SAMD11Q96NU1 681 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 CARD11Q9BXL7 1154 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 BHMT2Q9H2M3 363 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 CD320Q9NPF0 282 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 NTMQ9P121 344 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 ADAM29Q9UKF5 820 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 STXBP5LQ9Y2K9 1186 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 RIPOR2Q9Y4F9 1068 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 KCTD3Q9Y597 815 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 NR2E3Q9Y5X4 410 aa7.57□□□□□ -1.2
VPS50-212ENST00000476413 SLC16A6O15403 523 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 ADCY6O43306 1168 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 FTLP02792 175 aaPredicted RBP7.56□□□□□ -1.2
VPS50-212ENST00000476413 IL12RB1P42701 662 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 WNT3AP56704 352 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 SEMA5AQ13591 1074 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 TBR1Q16650 682 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 GJC2Q5T442 439 aaPredicted RBP7.56□□□□□ -1.2
VPS50-212ENST00000476413 AGBL4Q5VU57 503 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 FAM180AQ6UWF9 173 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 GPR155Q7Z3F1 870 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 TTC7BQ86TV6 843 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 DRC7Q8IY82 874 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 ZDHHC14Q8IZN3 488 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 TXNDC5Q8NBS9 432 aaKnown RBP7.56□□□□□ -1.2
VPS50-212ENST00000476413 OR7D4Q8NG98 312 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 KLHDC4Q8TBB5 520 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 ZNF480Q8WV37 535 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 MPHOSPH6Q99547 160 aaKnown RBP7.56□□□□□ -1.2
VPS50-212ENST00000476413 NAA15Q9BXJ9 866 aaKnown RBP7.56□□□□□ -1.2
VPS50-212ENST00000476413 BCO1Q9HAY6 547 aa7.56□□□□□ -1.2
VPS50-212ENST00000476413 ARID4BQ4LE39 1312 aaPredicted RBP7.55□□□□□ -1.2
VPS50-212ENST00000476413 DAPK3O43293 454 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 NBPF7P0C2Y1 421 aaPredicted RBP7.55□□□□□ -1.2
VPS50-212ENST00000476413 GUCY1A2P33402 732 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 KIR2DL3P43628 341 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 MEOX1P50221 254 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 HK3P52790 923 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 RRADP55042 308 aa7.55□□□□□ -1.2
VPS50-212ENST00000476413 ATP8B2P98198 1209 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms