RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TTLL13PA6NNM8 815 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 ACKR2O00590 384 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 N4BP3O15049 544 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 POMCP01189 267 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 GUCY2CP25092 1073 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 MLH1P40692 756 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 NPTX2P47972 431 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 AFF1P51825 1210 aaKnown RBP26.49■■□□□ 1.83
CPNE1-223ENST00000475146 SLC12A3P55017 1021 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 MAPK7Q13164 816 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 KARSQ15046 597 aaKnown RBP26.49■■□□□ 1.83
CPNE1-223ENST00000475146 FOXD4L5Q5VV16 416 aaPredicted RBP26.49■■□□□ 1.83
CPNE1-223ENST00000475146 ADGRD2Q7Z7M1 963 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 SPRYD3Q8NCJ5 442 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 FOXD4L4Q8WXT5 416 aaPredicted RBP26.49■■□□□ 1.83
CPNE1-223ENST00000475146 FAM193BQ96PV7 902 aaPredicted RBP26.49■■□□□ 1.83
CPNE1-223ENST00000475146 GAD1Q99259 594 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 PDZD7Q9H5P4 517 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 USP20Q9Y2K6 914 aa26.49■■□□□ 1.83
CPNE1-223ENST00000475146 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.48■■□□□ 1.83
CPNE1-223ENST00000475146 NCK2O43639 380 aa26.48■■□□□ 1.83
CPNE1-223ENST00000475146 PLCG1P19174 1290 aa26.48■■□□□ 1.83
CPNE1-223ENST00000475146 GTF2F1P35269 517 aaKnown RBP eCLIP26.48■■□□□ 1.832e-12■□□□□ 10
CPNE1-223ENST00000475146 ERVFC1P60507 584 aa26.48■■□□□ 1.83
CPNE1-223ENST00000475146 SPECC1Q5M775 1068 aa26.48■■□□□ 1.83
CPNE1-223ENST00000475146 TMEM169Q96HH4 297 aa26.48■■□□□ 1.83
CPNE1-223ENST00000475146 ADPGKQ9BRR6 497 aa26.48■■□□□ 1.83
CPNE1-223ENST00000475146 KMT5AQ9NQR1 393 aa26.48■■□□□ 1.83
CPNE1-223ENST00000475146 ENTPD7Q9NQZ7 604 aa26.48■■□□□ 1.83
CPNE1-223ENST00000475146 FBXO2Q9UK22 296 aaPredicted RBP26.48■■□□□ 1.83
CPNE1-223ENST00000475146 PHLPP2Q6ZVD8 1323 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 BRWD1Q9NSI6 2320 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 CARNS1A5YM72 827 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 SFI1A8K8P3 1242 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 K7ERI5 159 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 EDN1P05305 212 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 AKAP5P24588 427 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 DHX8Q14562 1220 aaKnown RBP26.47■■□□□ 1.83
CPNE1-223ENST00000475146 PLPP4Q5VZY2 271 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 PDE12Q6L8Q7 609 aaKnown RBP26.47■■□□□ 1.83
CPNE1-223ENST00000475146 RBM23Q86U06 439 aaKnown RBP26.47■■□□□ 1.83
CPNE1-223ENST00000475146 ZNF280BQ86YH2 543 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 ADAMTS19Q8TE59 1207 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 TCF25Q9BQ70 676 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 C17orf75Q9HAS0 396 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 KCND2Q9NZV8 630 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 DNAJB4Q9UDY4 337 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 PARP2Q9UGN5 583 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 GIT1Q9Y2X7 761 aa26.47■■□□□ 1.83
CPNE1-223ENST00000475146 SRPRBQ9Y5M8 271 aaKnown RBP26.47■■□□□ 1.83
CPNE1-223ENST00000475146 ARL5CA6NH57 179 aa26.46■■□□□ 1.83
CPNE1-223ENST00000475146 H3BQ06 376 aaPredicted RBP26.46■■□□□ 1.83
CPNE1-223ENST00000475146 GALTP07902 379 aa26.46■■□□□ 1.83
CPNE1-223ENST00000475146 NRIP1P48552 1158 aa26.46■■□□□ 1.83
CPNE1-223ENST00000475146 SLC11A1P49279 550 aa26.46■■□□□ 1.83
CPNE1-223ENST00000475146 COL19A1Q14993 1142 aa26.46■■□□□ 1.83
CPNE1-223ENST00000475146 GPBP1Q86WP2 473 aa26.46■■□□□ 1.83
CPNE1-223ENST00000475146 ZFP42Q96MM3 310 aa26.46■■□□□ 1.83
CPNE1-223ENST00000475146 CCSER1Q9C0I3 900 aa26.46■■□□□ 1.83
CPNE1-223ENST00000475146 NPHP3-ACAD11A0A0J9YXS1 232 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 FSCN2O14926 492 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 B4GALT3O60512 393 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 DDHD2O94830 711 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 BMP1P13497 986 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 SCNN1GP51170 649 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 CACNB1Q02641 598 aaPredicted RBP26.45■■□□□ 1.82
CPNE1-223ENST00000475146 LEXMQ3ZCV2 418 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 EEF1DP3Q658K8 133 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 TMEM173Q86WV6 379 aaPredicted RBP26.45■■□□□ 1.82
CPNE1-223ENST00000475146 LRRC15Q8TF66 581 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 RAD54LQ92698 747 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 EPSTI1Q96J88 318 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 CLIC6Q96NY7 704 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 TLE6Q9H808 572 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 BLOC1S4Q9NUP1 217 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 KLK14Q9P0G3 267 aa26.45■■□□□ 1.82
CPNE1-223ENST00000475146 REV3LO60673 3130 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 SLC16A4O15374 487 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 PDIA4P13667 645 aaKnown RBP26.44■■□□□ 1.82
CPNE1-223ENST00000475146 PLS3P13797 630 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 TXLNAP40222 546 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 MCM6Q14566 821 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 SLC39A14Q15043 492 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 STK38Q15208 465 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 NT5DC1Q5TFE4 455 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 ATF7IP2Q5U623 682 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 USP49Q70CQ1 688 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 TMC7Q7Z402 723 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 IGSF21Q96ID5 467 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 ZNF396Q96N95 335 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-223ENST00000475146 RPS6KC1Q96S38 1066 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 TMEM175Q9BSA9 504 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 TMEM134Q9H6X4 195 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 ARHGAP28Q9P2N2 729 aa26.44■■□□□ 1.82
CPNE1-223ENST00000475146 RBM19Q9Y4C8 960 aaKnown RBP26.44■■□□□ 1.82
CPNE1-223ENST00000475146 PER2O15055 1255 aa26.43■■□□□ 1.82
CPNE1-223ENST00000475146 INPPL1O15357 1258 aa26.43■■□□□ 1.82
CPNE1-223ENST00000475146 LINC01565O15544 149 aa26.43■■□□□ 1.82
CPNE1-223ENST00000475146 KRT18P05783 430 aaKnown RBP26.43■■□□□ 1.82
CPNE1-223ENST00000475146 CA8P35219 290 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms