RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 RBM10P98175 930 aaKnown RBP11.25□□□□□ -0.61
SF3A3-204ENST00000462258 CUL4AQ13619 759 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 PPP2R5AQ15172 486 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 SMAD2Q15796 467 aaKnown RBP11.25□□□□□ -0.61
SF3A3-204ENST00000462258 LARP1BQ659C4 914 aaKnown RBP11.25□□□□□ -0.61
SF3A3-204ENST00000462258 TMC7Q7Z402 723 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 CDR2LQ86X02 465 aaPredicted RBP11.25□□□□□ -0.61
SF3A3-204ENST00000462258 ZNF280BQ86YH2 543 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 SMRP1Q8NCR6 262 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 VN1R2Q8NFZ6 395 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 DEPTORQ8TB45 409 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 BCL7CQ8WUZ0 217 aaPredicted RBP11.25□□□□□ -0.61
SF3A3-204ENST00000462258 IGSF21Q96ID5 467 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 MSLNLQ96KJ4 702 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 FAM193BQ96PV7 902 aaPredicted RBP11.25□□□□□ -0.61
SF3A3-204ENST00000462258 KIFC3Q9BVG8 833 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 APOL6Q9BWW8 343 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 ZBP1Q9H171 429 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 CLEC1BQ9P126 229 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 HES2Q9Y543 173 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 ZMYM2Q9UBW7 1377 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.24□□□□□ -0.61
SF3A3-204ENST00000462258 VPS37CA5D8V6 355 aaPredicted RBP11.24□□□□□ -0.61
SF3A3-204ENST00000462258 VWA3AA6NCI4 1184 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 INPPL1O15357 1258 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 DDHD2O94830 711 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 EYA4O95677 639 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 PRKCBP05771 671 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 CDC25AP30304 524 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 SCNN1GP51170 649 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 ZP2Q05996 745 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 COASYQ13057 564 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 ZRSR1Q15695 479 aaKnown RBP11.24□□□□□ -0.61
SF3A3-204ENST00000462258 MAPK6Q16659 721 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 FAM187BQ17R55 369 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 TMEM132AQ24JP5 1023 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 BRAPQ7Z569 592 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 GJD3Q8N144 294 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 VPS52Q8N1B4 723 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 KIFAP3Q92845 792 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 IFT74Q96LB3 600 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 GAD1Q99259 594 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 TMEM175Q9BSA9 504 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 MMTAG2Q9BU76 263 aaKnown RBP11.24□□□□□ -0.61
SF3A3-204ENST00000462258 CCDC113Q9H0I3 377 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 FZD8Q9H461 694 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 PDZD7Q9H5P4 517 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 CD320Q9NPF0 282 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 KANSL3Q9P2N6 904 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 PRKAG3Q9UGI9 489 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 DNM3Q9UQ16 869 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 PHLPP2Q6ZVD8 1323 aa11.24□□□□□ -0.61
SF3A3-204ENST00000462258 PLXNA3P51805 1871 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 A0A1B0GUA9 196 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 C2orf71A6NGG8 1288 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 ARL5CA6NH57 179 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 N4BP3O15049 544 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 EDN1P05305 212 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 LIG1P18858 919 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 PRPF4BQ13523 1007 aaKnown RBP11.23□□□□□ -0.61
SF3A3-204ENST00000462258 BMS1Q14692 1282 aaKnown RBP11.23□□□□□ -0.61
SF3A3-204ENST00000462258 ARL6IP4Q66PJ3 421 aaKnown RBP11.23□□□□□ -0.61
SF3A3-204ENST00000462258 LLGL2Q6P1M3 1020 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 KCNK18Q7Z418 384 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 DDX53Q86TM3 631 aaKnown RBP11.23□□□□□ -0.61
SF3A3-204ENST00000462258 ADHFE1Q8IWW8 467 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 CDK5RAP3Q96JB5 506 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 ZFP42Q96MM3 310 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 POP1Q99575 1024 aaKnown RBP11.23□□□□□ -0.61
SF3A3-204ENST00000462258 RUSC1Q9BVN2 902 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 VN1R3Q9BXE9 311 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 MARCH5Q9NX47 278 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 GIT1Q9Y2X7 761 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 PRG3Q9Y2Y8 225 aaPredicted RBP11.23□□□□□ -0.61
SF3A3-204ENST00000462258 DENND4AQ7Z401 1863 aa11.23□□□□□ -0.61
SF3A3-204ENST00000462258 TTLL13PA6NNM8 815 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 ACKR2O00590 384 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 HIP1RO75146 1068 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 BMP15O95972 392 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 CTSAP10619 480 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 PDCP20941 246 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 AKAP5P24588 427 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 OR1G1P47890 313 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 EFNA5P52803 228 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 DSC1Q08554 894 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 GRIK3Q13003 919 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 DMP1Q13316 513 aaPredicted RBP11.22□□□□□ -0.61
SF3A3-204ENST00000462258 KCNC3Q14003 757 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 PDCD11Q14690 1871 aaKnown RBP11.22□□□□□ -0.61
SF3A3-204ENST00000462258 HYIQ5T013 277 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 COLGALT2Q8IYK4 626 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 MRPL43Q8N983 215 aaKnown RBP11.22□□□□□ -0.61
SF3A3-204ENST00000462258 AUTS2Q8WXX7 1259 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 KHSRPQ92945 711 aaKnown RBP eCLIP11.22□□□□□ -0.61
SF3A3-204ENST00000462258 DRC1Q96MC2 740 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 PNMA5Q96PV4 448 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 RPS6KC1Q96S38 1066 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 ADPGKQ9BRR6 497 aa11.22□□□□□ -0.61
SF3A3-204ENST00000462258 NT5C3AQ9H0P0 336 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms