RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 FAM20AQ96MK3 541 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 TACO1Q9BSH4 297 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 CDC42EP4Q9H3Q1 356 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 MTRF1LQ9UGC7 380 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 FRMD4BQ9Y2L6 1034 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 QSER1Q2KHR3 1735 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 EP400Q96L91 3159 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 EMSYQ7Z589 1322 aa12.63□□□□□ -0.39
PDZRN3-203ENST00000462146 IGLV3-22A0A075B6J6 115 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 TCP11X1B4DZS4 312 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 OAS1P00973 400 aaKnown RBP12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 GH1P01241 217 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 DLATP10515 647 aaKnown RBP12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 GAP43P17677 238 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 CHKAP35790 457 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 PSEN1P49768 467 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 ADCY1Q08828 1119 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 SIX1Q15475 284 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 PPP2R5EQ16537 467 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 NSMFQ6X4W1 530 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 FBXO11Q86XK2 927 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 RHOT2Q8IXI1 618 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 FAM178BQ8IXR5 827 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 UBL4BQ8N7F7 174 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 GDAP1Q8TB36 358 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 AGAP11Q8TF27 550 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 HSD17B14Q9BPX1 270 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 GLT8D2Q9H1C3 349 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 CCDC134Q9H6E4 229 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 AAASQ9NRG9 546 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 DMAC2Q9NW81 257 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 CNOT7Q9UIV1 285 aaKnown RBP12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 TRIM33Q9UPN9 1127 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 DDTLA6NHG4 134 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 TP73O15350 636 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 EXOC3O60645 756 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 SGPL1O95470 568 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 HLA-DOAP06340 250 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 GSTA1P08263 222 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 CDC25CP30307 473 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 COILP38432 576 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 ALDH5A1P51649 535 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 TNIP1Q15025 636 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 ZKSCAN8Q15776 578 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 CRY2Q49AN0 593 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 SEL1L2Q5TEA6 688 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 C11orf63Q6NUN7 778 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 SEPT14Q6ZU15 432 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 DYDC1Q8WWB3 177 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 ART4Q93070 314 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 PWWP2AQ96N64 755 aa12.62□□□□□ -0.39
PDZRN3-203ENST00000462146 RARGP13631 454 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 PAX7P23759 505 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 GBP2P32456 591 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 GCLMP48507 274 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 PPP3CAQ08209 521 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 SNX1Q13596 522 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 TBC1D10BQ4KMP7 808 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 ODR4Q5SWX8 454 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 APOBEC3HQ6NTF7 200 aaKnown RBP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 VSTM1Q6UX27 236 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 HS2ST1Q7LGA3 356 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 OTOP1Q7RTM1 612 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 NSMCE1Q8WV22 266 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 C1orf54Q8WWF1 131 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 ECT2Q9H8V3 914 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 TMEM120BA0PK00 339 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 F5H6K3 240 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 IGF2BP3O00425 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 CHRNB2P17787 502 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 PAXIP1Q6ZW49 1069 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 DCAF4Q8WV16 495 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 RBM17Q96I25 401 aaKnown RBP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 MKNK1Q9BUB5 465 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 PODXLO00592 558 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 SKAP2O75563 359 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 NQO1P15559 274 aaKnown RBP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 CIITAP33076 1130 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 GPC5P78333 572 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 MPP2Q14168 576 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 TRIP13Q15645 432 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 CERKLQ49MI3 558 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 LRCH2Q5VUJ6 765 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 NUGGCQ68CJ6 796 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 NOP9Q86U38 636 aaKnown RBP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 SLC13A5Q86YT5 568 aaPredicted RBP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 SPICE1Q8N0Z3 855 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 ARHGEF2Q92974 986 aaKnown RBP12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 CD101Q93033 1021 aa12.61□□□□□ -0.39
PDZRN3-203ENST00000462146 MIF4GDA9UHW6 222 aaKnown RBP12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 CLDN3O15551 220 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 CALCAP01258 141 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 KRT16P08779 473 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 JAG1P78504 1218 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 ICA1Q05084 483 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 NAA25Q14CX7 972 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 SLC15A2Q16348 729 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms