RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 PEX19P40855 299 aa17.56■□□□□ 0.4
PIKFYVE-206ENST00000443896 NT5DC3Q86UY8 548 aa17.56■□□□□ 0.4
PIKFYVE-206ENST00000443896 RFFLQ8WZ73 363 aa17.56■□□□□ 0.4
PIKFYVE-206ENST00000443896 HVCN1Q96D96 273 aa17.56■□□□□ 0.4
PIKFYVE-206ENST00000443896 KRT12Q99456 494 aa17.56■□□□□ 0.4
PIKFYVE-206ENST00000443896 MTFR1LQ9H019 292 aa17.56■□□□□ 0.4
PIKFYVE-206ENST00000443896 USP20Q9Y2K6 914 aa17.56■□□□□ 0.4
PIKFYVE-206ENST00000443896 GCLMP48507 274 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 ATP1A2P50993 1020 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 HMGCS2P54868 508 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 TBX20Q9UMR3 447 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 EXOC7Q9UPT5 735 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 LRRN2O75325 713 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 HEXIM1O94992 359 aaKnown RBP17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 KCNA2P16389 499 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 TNFAIP3P21580 790 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 RNASE9P60153 205 aaKnown RBP17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 TNNC1P63316 161 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 NNTQ13423 1086 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 TRMT1LQ7Z2T5 733 aaKnown RBP17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 MAP4K3Q8IVH8 894 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 ARHGEF19Q8IW93 802 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 METTL13Q8N6R0 699 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 NSUN6Q8TEA1 469 aaKnown RBP17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 SCFD2Q8WU76 684 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 UBE2TQ9NPD8 197 aaPredicted RBP17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 C19orf81C9J6K1 198 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 ADSSP30520 456 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 NPTX2P47972 431 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 SMTNP53814 917 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 DAAM2Q86T65 1068 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 APOBEC3FQ8IUX4 373 aaKnown RBP17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 FAM76AQ8TAV0 307 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 SLC35G2Q8TBE7 412 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 HES6Q96HZ4 224 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 CABS1Q96KC9 395 aa17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 PPP1R1BQ9UD71 204 aaPredicted RBP17.55■□□□□ 0.4
PIKFYVE-206ENST00000443896 GOLGA6CA6NDK9 693 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 GOLGA6BA6NDN3 693 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 ATP2A1O14983 1001 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 ATP2C2O75185 946 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 RGS20O76081 388 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 GOLGA6DP0CG33 693 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 DMP1Q13316 513 aaPredicted RBP17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 TMEM132BQ14DG7 1078 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 ANGEL2Q5VTE6 544 aaKnown RBP17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 OTUD6BQ8N6M0 293 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 CTNNBL1Q8WYA6 563 aaPredicted RBP17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 AGPAT1Q99943 283 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 NTPCRQ9BSD7 190 aaKnown RBP17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 OSGEPQ9NPF4 335 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 GOLGA6AQ9NYA3 693 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 TMCO5BA8MYB1 307 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 CEP104O60308 925 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 STBD1O95210 358 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 ADRB2P07550 413 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 OTUD6AQ7L8S5 288 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 RASGEF1CQ8N431 466 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 SCLT1Q96NL6 688 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 TMEM117Q9H0C3 514 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 EPB41L5Q9HCM4 733 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 IGSF9BQ9UPX0 1349 aa17.54■□□□□ 0.4
PIKFYVE-206ENST00000443896 CCDC169A6NNP5 214 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 ZNF862O60290 1169 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 MXI1P50539 228 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 GUCY2DQ02846 1103 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 PPATQ06203 517 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 PRAMEF18Q5VWM3 479 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 SPIRE2Q8WWL2 714 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 KIFAP3Q92845 792 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.53■□□□□ 0.47e-8■■□□□ 11.7
PIKFYVE-206ENST00000443896 C17orf75Q9HAS0 396 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 GABBR1Q9UBS5 961 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 FZD1Q9UP38 647 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 WDR81Q562E7 1941 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 ANKRD63C9JTQ0 380 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 PGRMC1O00264 195 aaKnown RBP17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 CARSP49589 748 aaKnown RBP17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 SF3A3Q12874 501 aaKnown RBP eCLIP17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 PDCLQ13371 301 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 SNRNP35Q16560 246 aaKnown RBP17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 PTPROQ16827 1216 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 KCTD16Q68DU8 428 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 PALB2Q86YC2 1186 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 ATP6V0A1Q93050 837 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 TAS2R14Q9NYV8 317 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 NFASCO94856 1347 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 ZNF541Q9H0D2 1346 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 ANKRD62A6NC57 917 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 RAD51CO43502 376 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 BUB1BO60566 1050 aaPredicted RBP17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 CATSPERGQ6ZRH7 1159 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 CEP170P1Q96L14 293 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 KIFC3Q9BVG8 833 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 CYP39A1Q9NYL5 469 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 AMFRQ9UKV5 643 aa17.53■□□□□ 0.4
PIKFYVE-206ENST00000443896 ZSCAN5CA6NGD5 496 aaPredicted RBP17.52■□□□□ 0.4
PIKFYVE-206ENST00000443896 NDUFAB1O14561 156 aa17.52■□□□□ 0.4
PIKFYVE-206ENST00000443896 DKC1O60832 514 aaKnown RBP eCLIP17.52■□□□□ 0.4
PIKFYVE-206ENST00000443896 KIAA0754O94854 1291 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms