RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 ARMCX5Q6P1M9 558 aa23.06■■□□□ 1.28
VPS13B-204ENST00000441350 FAM114A1Q8IWE2 563 aa23.06■■□□□ 1.28
VPS13B-204ENST00000441350 HAPLN2Q9GZV7 340 aa23.06■■□□□ 1.28
VPS13B-204ENST00000441350 C11orf49Q9H6J7 331 aa23.06■■□□□ 1.28
VPS13B-204ENST00000441350 HSPBP1Q9NZL4 362 aa23.06■■□□□ 1.28
VPS13B-204ENST00000441350 KCNJ18B7U540 433 aa23.05■■□□□ 1.28
VPS13B-204ENST00000441350 ABLIM1O14639 778 aa23.05■■□□□ 1.28
VPS13B-204ENST00000441350 CKBP12277 381 aa23.05■■□□□ 1.28
VPS13B-204ENST00000441350 PROZP22891 400 aa23.05■■□□□ 1.28
VPS13B-204ENST00000441350 EEF1GP26641 437 aaKnown RBP23.05■■□□□ 1.28
VPS13B-204ENST00000441350 CYP2J2P51589 502 aa23.05■■□□□ 1.28
VPS13B-204ENST00000441350 KCNJ12Q14500 433 aa23.05■■□□□ 1.28
VPS13B-204ENST00000441350 TCP11X2Q5H9J9 407 aa23.05■■□□□ 1.28
VPS13B-204ENST00000441350 POMGNT1Q8WZA1 660 aa23.05■■□□□ 1.28
VPS13B-204ENST00000441350 ZBTB45Q96K62 511 aaPredicted RBP23.05■■□□□ 1.28
VPS13B-204ENST00000441350 TOX2Q96NM4 488 aa23.05■■□□□ 1.28
VPS13B-204ENST00000441350 TNFSF13BQ9Y275 285 aa23.05■■□□□ 1.28
VPS13B-204ENST00000441350 A0A0B4J269 797 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 AP5Z1O43299 807 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 AKAP3O75969 853 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 ERLIN2O94905 339 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 GNA14O95837 355 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 ARF4P18085 180 aaPredicted RBP23.04■■□□□ 1.28
VPS13B-204ENST00000441350 CDK11BP21127 795 aaKnown RBP23.04■■□□□ 1.28
VPS13B-204ENST00000441350 FGFR4P22455 802 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 CASP4P49662 377 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 MARSP56192 900 aaKnown RBP23.04■■□□□ 1.28
VPS13B-204ENST00000441350 SPAG1Q07617 926 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 ZNF618Q5T7W0 954 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 ATF7IP2Q5U623 682 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 CAGE1Q8TC20 777 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 CNOT6LQ96LI5 555 aaKnown RBP23.04■■□□□ 1.28
VPS13B-204ENST00000441350 MKNK1Q9BUB5 465 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 PCIF1Q9H4Z3 704 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 LRRC10BA6NIK2 292 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 KIAA0391O15091 583 aaKnown RBP23.04■■□□□ 1.28
VPS13B-204ENST00000441350 SLC16A3O15427 465 aaKnown RBP23.04■■□□□ 1.28
VPS13B-204ENST00000441350 PQBP1O60828 265 aaKnown RBP23.04■■□□□ 1.28
VPS13B-204ENST00000441350 SFPQP23246 707 aaKnown RBP eCLIP23.04■■□□□ 1.28
VPS13B-204ENST00000441350 TRAF7Q6Q0C0 670 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 SARM1Q6SZW1 724 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 CATSPER4Q7RTX7 472 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 APTXQ7Z2E3 356 aaKnown RBP23.04■■□□□ 1.28
VPS13B-204ENST00000441350 NECAB2Q7Z6G3 386 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 XXYLT1Q8NBI6 393 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 FBXL18Q96ME1 805 aa23.04■■□□□ 1.28
VPS13B-204ENST00000441350 MAGEC2Q9UBF1 373 aaPredicted RBP23.04■■□□□ 1.28
VPS13B-204ENST00000441350 LIMA1Q9UHB6 759 aaKnown RBP23.04■■□□□ 1.28
VPS13B-204ENST00000441350 NOC2LQ9Y3T9 749 aaKnown RBP23.04■■□□□ 1.28
VPS13B-204ENST00000441350 A0A1B0GUA9 196 aa23.03■■□□□ 1.28
VPS13B-204ENST00000441350 TLR3O15455 904 aaKnown RBP23.03■■□□□ 1.28
VPS13B-204ENST00000441350 CLDN3O15551 220 aa23.03■■□□□ 1.28
VPS13B-204ENST00000441350 EXOC3O60645 756 aa23.03■■□□□ 1.28
VPS13B-204ENST00000441350 HOXA11P31270 313 aaPredicted RBP23.03■■□□□ 1.28
VPS13B-204ENST00000441350 FANCCQ00597 558 aa23.03■■□□□ 1.28
VPS13B-204ENST00000441350 TLE2Q04725 743 aa23.03■■□□□ 1.28
VPS13B-204ENST00000441350 MCL1Q07820 350 aa23.03■■□□□ 1.28
VPS13B-204ENST00000441350 TRIM60Q495X7 471 aa23.03■■□□□ 1.28
VPS13B-204ENST00000441350 EEF1DP3Q658K8 133 aa23.03■■□□□ 1.28
VPS13B-204ENST00000441350 CEP135Q66GS9 1140 aa23.03■■□□□ 1.28
VPS13B-204ENST00000441350 ZSWIM2Q8NEG5 633 aa23.03■■□□□ 1.28
VPS13B-204ENST00000441350 ANKFY1Q9P2R3 1169 aa23.03■■□□□ 1.28
VPS13B-204ENST00000441350 PSMC2P35998 433 aaKnown RBP23.02■■□□□ 1.28
VPS13B-204ENST00000441350 KRT31Q15323 416 aa23.02■■□□□ 1.28
VPS13B-204ENST00000441350 FBXO47Q5MNV8 452 aa23.02■■□□□ 1.28
VPS13B-204ENST00000441350 MPZL3Q6UWV2 235 aa23.02■■□□□ 1.28
VPS13B-204ENST00000441350 FRMD5Q7Z6J6 570 aa23.02■■□□□ 1.28
VPS13B-204ENST00000441350 FAM228AQ86W67 206 aa23.02■■□□□ 1.28
VPS13B-204ENST00000441350 CCDC155Q8N6L0 562 aa23.02■■□□□ 1.28
VPS13B-204ENST00000441350 BORCS6Q96GS4 357 aa23.02■■□□□ 1.28
VPS13B-204ENST00000441350 CPB2Q96IY4 423 aa23.02■■□□□ 1.28
VPS13B-204ENST00000441350 PDZD7Q9H5P4 517 aa23.02■■□□□ 1.28
VPS13B-204ENST00000441350 AGPAT5Q9NUQ2 364 aa23.02■■□□□ 1.28
VPS13B-204ENST00000441350 AGO2Q9UKV8 859 aaKnown RBP23.02■■□□□ 1.28
VPS13B-204ENST00000441350 FRMD4BQ9Y2L6 1034 aa23.02■■□□□ 1.28
VPS13B-204ENST00000441350 SQORQ9Y6N5 450 aa23.02■■□□□ 1.28
VPS13B-204ENST00000441350 DCDC2CA8MYV0 355 aa23.01■■□□□ 1.27
VPS13B-204ENST00000441350 MAPK13O15264 365 aa23.01■■□□□ 1.27
VPS13B-204ENST00000441350 EPB41P11171 864 aaKnown RBP23.01■■□□□ 1.27
VPS13B-204ENST00000441350 AXLP30530 894 aa23.01■■□□□ 1.27
VPS13B-204ENST00000441350 FAAP100Q0VG06 881 aa23.01■■□□□ 1.27
VPS13B-204ENST00000441350 BFSP2Q13515 415 aa23.01■■□□□ 1.27
VPS13B-204ENST00000441350 UBE2Q1Q7Z7E8 422 aa23.01■■□□□ 1.27
VPS13B-204ENST00000441350 TCHPQ9BT92 498 aa23.01■■□□□ 1.27
VPS13B-204ENST00000441350 MSTO1Q9BUK6 570 aa23.01■■□□□ 1.27
VPS13B-204ENST00000441350 PITPNM1O00562 1244 aa23■■□□□ 1.27
VPS13B-204ENST00000441350 FAM189A1O60320 539 aa23■■□□□ 1.27
VPS13B-204ENST00000441350 RPS6KA5O75582 802 aa23■■□□□ 1.27
VPS13B-204ENST00000441350 EN2P19622 333 aaPredicted RBP23■■□□□ 1.27
VPS13B-204ENST00000441350 NCBP1Q09161 790 aaKnown RBP23■■□□□ 1.27
VPS13B-204ENST00000441350 NOLC1Q14978 699 aaKnown RBP eCLIP23■■□□□ 1.27
VPS13B-204ENST00000441350 TMEM132AQ24JP5 1023 aa23■■□□□ 1.27
VPS13B-204ENST00000441350 CCDC40Q4G0X9 1142 aa23■■□□□ 1.27
VPS13B-204ENST00000441350 CDR2LQ86X02 465 aaPredicted RBP23■■□□□ 1.27
VPS13B-204ENST00000441350 FAM186BQ8IYM0 893 aa23■■□□□ 1.27
VPS13B-204ENST00000441350 GPD1LQ8N335 351 aa23■■□□□ 1.27
VPS13B-204ENST00000441350 SAAL1Q96ER3 474 aa23■■□□□ 1.27
VPS13B-204ENST00000441350 OSBPL7Q9BZF2 842 aa23■■□□□ 1.27
VPS13B-204ENST00000441350 AGO3Q9H9G7 860 aaKnown RBP23■■□□□ 1.27
VPS13B-204ENST00000441350 GOLGA8IPA6NC78 632 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms