RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 MEIS1O00470 390 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 NCAM2O15394 837 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 LILRB3O75022 631 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 PAPLNO95428 1278 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 CYP3A4P08684 503 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 TDGF1P13385 188 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 CLK2P49760 499 aaKnown RBP11.54□□□□□ -0.56
HOXD3-203ENST00000432796 CCT2P78371 535 aaKnown RBP11.54□□□□□ -0.56
HOXD3-203ENST00000432796 FUT2Q10981 343 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 PRR16Q569H4 304 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 GALNT17Q6IS24 598 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 ZNF746Q6NUN9 644 aaPredicted RBP11.54□□□□□ -0.56
HOXD3-203ENST00000432796 PHKBQ93100 1093 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 ZNF707Q96C28 371 aaPredicted RBP11.54□□□□□ -0.56
HOXD3-203ENST00000432796 PPP1R16BQ96T49 567 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 NELL2Q99435 816 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 RPP25Q9BUL9 199 aaKnown RBP11.54□□□□□ -0.56
HOXD3-203ENST00000432796 TM6SF1Q9BZW5 370 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 BRMS1Q9HCU9 246 aa11.54□□□□□ -0.56
HOXD3-203ENST00000432796 ZFP37Q9Y6Q3 630 aaPredicted RBP11.54□□□□□ -0.56
HOXD3-203ENST00000432796 PATJQ8NI35 1801 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 WDR64B1ANS9 1081 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 GAS7O60861 476 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 GPR32O75388 356 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 RFPL2O75678 378 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 GALTP07902 379 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 CD72P21854 359 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 TARSP26639 723 aaKnown RBP11.53□□□□□ -0.56
HOXD3-203ENST00000432796 TMOD1P28289 359 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 PFKPQ01813 784 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 MTAPQ13126 283 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 PPP2R5DQ14738 602 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 ZNF484Q5JVG2 852 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 TYW1BQ6NUM6 668 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 ST13P5Q8NFI4 369 aaPredicted RBP11.53□□□□□ -0.56
HOXD3-203ENST00000432796 WASF1Q92558 559 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 FGF14Q92915 247 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 ZNF274Q96GC6 653 aaPredicted RBP11.53□□□□□ -0.56
HOXD3-203ENST00000432796 SCLT1Q96NL6 688 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 MAP7D2Q96T17 732 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 TMEM121BQ9BXQ6 578 aaPredicted RBP11.53□□□□□ -0.56
HOXD3-203ENST00000432796 AGXT2Q9BYV1 514 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 SLKQ9H2G2 1235 aaPredicted RBP11.53□□□□□ -0.56
HOXD3-203ENST00000432796 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 MRPL17Q9NRX2 175 aaKnown RBP11.53□□□□□ -0.56
HOXD3-203ENST00000432796 VPS54Q9P1Q0 977 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 LOC400499M0QZD8 3231 aa11.53□□□□□ -0.56
HOXD3-203ENST00000432796 DSPP15924 2871 aaKnown RBP11.53□□□□□ -0.56
HOXD3-203ENST00000432796 NBEAQ8NFP9 2946 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 TAF4O00268 1085 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 MARCH6O60337 910 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 KCNK5O95279 499 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 GLUD1P00367 558 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 ADH1AP07327 375 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 PDIA3P30101 505 aaKnown RBP11.52□□□□□ -0.57
HOXD3-203ENST00000432796 SFNP31947 248 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 JAK3P52333 1124 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 SIM2Q14190 667 aaPredicted RBP11.52□□□□□ -0.57
HOXD3-203ENST00000432796 AASDHQ4L235 1098 aaPredicted RBP11.52□□□□□ -0.57
HOXD3-203ENST00000432796 PARM1Q6UWI2 310 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.52□□□□□ -0.57
HOXD3-203ENST00000432796 ZNF710Q8N1W2 664 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 NAP1L4Q99733 375 aaKnown RBP11.52□□□□□ -0.57
HOXD3-203ENST00000432796 TEKT3Q9BXF9 490 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 NRDE2Q9H7Z3 1164 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 PIDD1Q9HB75 910 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
HOXD3-203ENST00000432796 PCDHA10Q9Y5I2 948 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 C2orf16Q68DN1 1984 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 COL4A3Q01955 1670 aa11.52□□□□□ -0.57
HOXD3-203ENST00000432796 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 MAGEB2O15479 319 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 VTNP04004 478 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 SSBP05455 408 aaKnown RBP eCLIP11.51□□□□□ -0.57
HOXD3-203ENST00000432796 USP11P51784 963 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 ANAPC15P60006 121 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 STK3Q13188 491 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 ITGB3BPQ13352 177 aaPredicted RBP11.51□□□□□ -0.57
HOXD3-203ENST00000432796 LRCH2Q5VUJ6 765 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 SWSAP1Q6NVH7 229 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 MAMSTRQ6ZN01 415 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 TPRG1Q6ZUI0 275 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 MTSS1LQ765P7 747 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 KRT25Q7Z3Z0 450 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 METTL13Q8N6R0 699 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 HDAC7Q8WUI4 952 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 NRBP2Q9NSY0 501 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 TBC1D13Q9NVG8 400 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 PCDHA4Q9UN74 947 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 MRPS17Q9Y2R5 130 aaKnown RBP11.51□□□□□ -0.57
HOXD3-203ENST00000432796 LAMA5O15230 3695 aa11.51□□□□□ -0.57
HOXD3-203ENST00000432796 MYH9P35579 1960 aaKnown RBP11.5□□□□□ -0.57
HOXD3-203ENST00000432796 ITPR1Q14643 2758 aa11.5□□□□□ -0.57
HOXD3-203ENST00000432796 FAM86B1E9PN63 330 aa11.5□□□□□ -0.57
HOXD3-203ENST00000432796 TEX28O15482 410 aa11.5□□□□□ -0.57
HOXD3-203ENST00000432796 DKC1O60832 514 aaKnown RBP eCLIP11.5□□□□□ -0.57
HOXD3-203ENST00000432796 ATG7O95352 703 aa11.5□□□□□ -0.57
HOXD3-203ENST00000432796 ZIC2O95409 532 aaPredicted RBP11.5□□□□□ -0.57
HOXD3-203ENST00000432796 C22orf31O95567 290 aa11.5□□□□□ -0.57
HOXD3-203ENST00000432796 URODP06132 367 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms