RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 EFCAB13Q8IY85 973 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 KCNF1Q9H3M0 494 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 NID2Q14112 1375 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 FTLP02792 175 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-208ENST00000430669 LRP10Q7Z4F1 713 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 TMEM60Q9H2L4 133 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 TAF1DQ9H5J8 278 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-208ENST00000430669 GGA3Q9NZ52 723 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 NNTQ13423 1086 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 GH1P01241 217 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 UCHL3P15374 230 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 CRY2Q49AN0 593 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 MUM1L1Q5H9M0 696 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 PPFIBP2Q8ND30 876 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 GDAP1L1Q96MZ0 367 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 CALN1Q9BXU9 219 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 WDR35Q9P2L0 1181 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 GYPCP04921 128 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 VIL1P09327 827 aaKnown RBP12.32□□□□□ -0.44
PTCH1-208ENST00000430669 MSH2P43246 934 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 DHX9Q08211 1270 aaKnown RBP12.32□□□□□ -0.44
PTCH1-208ENST00000430669 EZH2Q15910 746 aaKnown RBP12.32□□□□□ -0.44
PTCH1-208ENST00000430669 NAA35Q5VZE5 725 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 ELMSAN1Q6PJG2 1045 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 RNF139Q8WU17 664 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 TTC1Q99614 292 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 VCXQ9H320 206 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 MROH8Q9H579 483 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 DBR1Q9UK59 544 aaKnown RBP12.32□□□□□ -0.44
PTCH1-208ENST00000430669 PNMA6AP0CW24 399 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-208ENST00000430669 SLC26A2P50443 739 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 PLTPP55058 493 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 BAATQ14032 418 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-208ENST00000430669 NAB2Q15742 525 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 PDIK1LQ8N165 341 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 ACAP3Q96P50 834 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 IL17RBQ9NRM6 502 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 SUCLA2Q9P2R7 463 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-208ENST00000430669 NOC2LQ9Y3T9 749 aaKnown RBP12.32□□□□□ -0.44
PTCH1-208ENST00000430669 MYBPC2Q14324 1141 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 RSRC2Q7L4I2 434 aaKnown RBP12.32□□□□□ -0.44
PTCH1-208ENST00000430669 TUBB6Q9BUF5 446 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 SNX12Q9UMY4 172 aa12.32□□□□□ -0.44
PTCH1-208ENST00000430669 IQANK1A0A1B0GTG1 560 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 MSH4O15457 936 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 SLC37A4O43826 429 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 EMC2Q15006 297 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 FBXO38Q6PIJ6 1188 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 MAF1Q9H063 256 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 KCNQ5Q9NR82 932 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 RRN3P2A6NIE6 340 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 GOLGA8SH3BPF8 625 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 ZNF131P52739 623 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 IER5Q5VY09 327 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 OR6J1Q8NGC5 347 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 ECM29Q5VYK3 1845 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 NPHP3-ACAD11A0A0J9YXS1 232 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 PRKCEQ02156 737 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 STK4Q13043 487 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 SGSM1Q2NKQ1 1148 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 MKL1Q969V6 931 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 VIPAS39Q9H9C1 493 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 PAMP19021 973 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 VPS41P49754 854 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 COG7P83436 770 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 IFRD2Q12894 506 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-208ENST00000430669 TFDP2Q14188 446 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 PIGHQ14442 188 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-208ENST00000430669 ZNF710Q8N1W2 664 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 SCFD2Q8WU76 684 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 TGFB3P10600 412 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 CPT1AP50416 773 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 TSPY1Q01534 308 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 PTPN21Q16825 1174 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 TWF2Q6IBS0 349 aaKnown RBP12.31□□□□□ -0.44
PTCH1-208ENST00000430669 GPRC5AQ8NFJ5 357 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 FUCA2Q9BTY2 467 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 VCX3BQ9H321 246 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 HBP1O60381 514 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 NR3C2P08235 984 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 OSTNP61366 133 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 PTPROQ16827 1216 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 SCARA5Q6ZMJ2 495 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 SRRM1Q8IYB3 904 aaKnown RBP12.31□□□□□ -0.44
PTCH1-208ENST00000430669 TC2NQ8N9U0 490 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 SEPT1Q8WYJ6 367 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 MRRFQ96E11 262 aaKnown RBP12.31□□□□□ -0.44
PTCH1-208ENST00000430669 TBX20Q9UMR3 447 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 WNK3Q9BYP7 1800 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 FAM237AA0A1B0GTK4 181 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 LRRD1A4D1F6 860 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 F8W8V4 182 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 KRT10P13645 584 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 PSMC4P43686 418 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 GTF2A2P52657 109 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 CPSF3Q9UKF6 684 aaKnown RBP12.31□□□□□ -0.44
PTCH1-208ENST00000430669 PPP1R9AQ9ULJ8 1098 aa12.31□□□□□ -0.44
PTCH1-208ENST00000430669 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-208ENST00000430669 STRCP1A6NGW2 1772 aa12.3□□□□□ -0.44
PTCH1-208ENST00000430669 ZC3H11AO75152 810 aaKnown RBP eCLIP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms