RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ANO3Q9BYT9 981 aa6.89□□□□□ -1.31
HMGB3P5-201ENST00000428894 RAB11FIP3O75154 756 aa6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 ALDH1A2O94788 518 aa6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 LY86O95711 162 aa6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 XPAP23025 273 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 FNDC7Q5VTL7 733 aa6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 BROXQ5VW32 411 aa6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 ZNF662Q6ZS27 426 aa6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 CXorf67Q86X51 503 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 ATXN2LQ8WWM7 1075 aaKnown RBP6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 EMC7Q9NPA0 242 aa6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 USP35Q9P2H5 1018 aa6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 KCNG1Q9UIX4 513 aa6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 TBX22Q9Y458 520 aa6.88□□□□□ -1.31
HMGB3P5-201ENST00000428894 BCORL1Q5H9F3 1711 aa6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 KIAA0556O60303 1618 aa6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 XDHP47989 1333 aa6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 STC2O76061 302 aa6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 GYS2P54840 703 aa6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 DDB1Q16531 1140 aa6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 PLEKHG4Q58EX7 1191 aa6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 MB21D1Q8N884 522 aa6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 SLC5A5Q92911 643 aa6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 FDXACB1Q9BRP7 624 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 MAPRE3Q9UPY8 281 aa6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 REXO2Q9Y3B8 237 aaKnown RBP6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 PPP2R3BQ9Y5P8 575 aa6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 NUMBLQ9Y6R0 609 aa6.87□□□□□ -1.31
HMGB3P5-201ENST00000428894 GOLGA3Q08378 1498 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 RAPGEF2Q9Y4G8 1499 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 KDM1AO60341 852 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 NRP2O60462 931 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 IPO13O94829 963 aaKnown RBP6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 SEC24DO94855 1032 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 GPR15P49685 360 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 RABGGTBP53611 331 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 MANFP55145 182 aaKnown RBP6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 PPARAQ07869 468 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 ATP13A4Q4VNC1 1196 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 TAS1R1Q7RTX1 841 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 MDGA1Q8NFP4 955 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 OR5M3Q8NGP4 307 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 ZNF483Q8TF39 744 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 NEU4Q8WWR8 484 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 USP7Q93009 1102 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 PGBD4Q96DM1 585 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 MNTQ99583 582 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 EPC1Q9H2F5 836 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 MMRN2Q9H8L6 949 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 SLC2A4RGQ9NR83 387 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 TMPRSS11EQ9UL52 423 aa6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 NOC2LQ9Y3T9 749 aaKnown RBP6.86□□□□□ -1.31
HMGB3P5-201ENST00000428894 POGZQ7Z3K3 1410 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 KLRG2A4D1S0 409 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 GOLGA6L6A8MZA4 724 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 NRP1O14786 923 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 CLEC2LP0C7M8 214 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 GNAT2P19087 354 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 HSPA2P54652 639 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 NRG3P56975 720 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 TGFB2P61812 414 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 SLC25A3Q00325 362 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 MGAT5Q09328 741 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 FAM214AQ32MH5 1076 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 LMBR1LQ6UX01 489 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 RASSF3Q86WH2 238 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 ST8SIA2Q92186 375 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 TRIM8Q9BZR9 551 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 ENKD1Q9H0I2 346 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 WNT8AQ9H1J5 351 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 PRSS50Q9UI38 385 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 NEO1Q92859 1461 aa6.85□□□□□ -1.31
HMGB3P5-201ENST00000428894 MADDQ8WXG6 1647 aa6.84□□□□□ -1.31
HMGB3P5-201ENST00000428894 HOXA3O43365 443 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P5-201ENST00000428894 PEX11BO96011 259 aa6.84□□□□□ -1.31
HMGB3P5-201ENST00000428894 BPIP17213 487 aa6.84□□□□□ -1.31
HMGB3P5-201ENST00000428894 MAKP20794 623 aa6.84□□□□□ -1.31
HMGB3P5-201ENST00000428894 CASRP41180 1078 aa6.84□□□□□ -1.31
HMGB3P5-201ENST00000428894 TOB2Q14106 344 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P5-201ENST00000428894 CCDC178Q5BJE1 867 aa6.84□□□□□ -1.31
HMGB3P5-201ENST00000428894 TAF7LQ5H9L4 462 aa6.84□□□□□ -1.31
HMGB3P5-201ENST00000428894 CCDC62Q6P9F0 684 aa6.84□□□□□ -1.31
HMGB3P5-201ENST00000428894 APBB1IPQ7Z5R6 666 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P5-201ENST00000428894 ABCA8O94911 1581 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 A0A1W2PR48 441 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 TLDC2A0PJX2 215 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 SUV39H1O43463 412 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 FAM20BO75063 409 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 CFBP00751 764 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 ADH4P08319 380 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 HK1P19367 917 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 TRIM25Q14258 630 aaKnown RBP6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 DHCR24Q15392 516 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 C1QL3Q5VWW1 255 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 DDX46Q7L014 1031 aaKnown RBP6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 LYSMD2Q8IV50 215 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 MSL3Q8N5Y2 521 aaKnown RBP6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 RSAD2Q8WXG1 361 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 CLIP3Q96DZ5 547 aa6.83□□□□□ -1.32
HMGB3P5-201ENST00000428894 CPPED1Q9BRF8 314 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms