RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 ADGRF4Q8IZF3 695 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 SYCE1Q8N0S2 351 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 ZNF713Q8N859 430 aaPredicted RBP18.74■□□□□ 0.59
PMS1-206ENST00000418224 LRRC8CQ8TDW0 803 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 HES6Q96HZ4 224 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 PICK1Q9NRD5 415 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 DNAJC17Q9NVM6 304 aaKnown RBP18.74■□□□□ 0.59
PMS1-206ENST00000418224 RASAL2Q9UJF2 1139 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 KDM3AQ9Y4C1 1321 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 GNPATO15228 680 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 CYP11B2P19099 503 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 GSTT1P30711 240 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 ZC2HC1CQ53FD0 456 aaPredicted RBP18.74■□□□□ 0.59
PMS1-206ENST00000418224 ASPRV1Q53RT3 343 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 AGGF1Q8N302 714 aaeCLIP18.74■□□□□ 0.59
PMS1-206ENST00000418224 JMJD4Q9H9V9 463 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 MTMR4Q9NYA4 1195 aa18.74■□□□□ 0.59
PMS1-206ENST00000418224 MAST2Q6P0Q8 1798 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 MEIS1O00470 390 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 PPP1R11O60927 126 aaPredicted RBP18.73■□□□□ 0.59
PMS1-206ENST00000418224 CBX6O95503 412 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 MAPK7Q13164 816 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 NDNQ99608 321 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 LRMDAQ9H2I8 198 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 PSTPIP2Q9H939 334 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 PCDHA2Q9Y5H9 948 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 SPATA31A1Q5TZJ5 1347 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 IRS2Q9Y4H2 1338 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 USP17L15C9J2P7 530 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 USP17L13C9JLJ4 530 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 USP17L11C9JVI0 530 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 USP17L18D6R9N7 530 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 USP17L22D6RA61 530 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 USP17L17D6RBQ6 530 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 USP17L19D6RCP7 530 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 USP17L20D6RJB6 530 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 AKR1B1P15121 316 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 SKIV2L2P42285 1042 aaKnown RBP18.73■□□□□ 0.59
PMS1-206ENST00000418224 USP17L24Q0WX57 530 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 PARP6Q2NL67 630 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 GJB7Q6PEY0 223 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 USP17L6PQ6QN14 398 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 MIGA2Q7L4E1 593 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 SLFN11Q7Z7L1 901 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 ZNF333Q96JL9 665 aa18.73■□□□□ 0.59
PMS1-206ENST00000418224 ROBO1Q9Y6N7 1651 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 PNMA6FA0A0J9YX94 578 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 XRCC5P13010 732 aaKnown RBP18.72■□□□□ 0.59
PMS1-206ENST00000418224 FOXR2Q6PJQ5 311 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 BTNL9Q6UXG8 535 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 KCTD1Q719H9 257 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 CROCCP2Q86T23 111 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 FAM136AQ96C01 138 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 CTTNBP2NLQ9P2B4 639 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 NARFQ9UHQ1 456 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 PFASO15067 1338 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 NAV1Q8NEY1 1877 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 FAM187AA6NFU0 413 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 UBTFL6P0CB48 400 aaPredicted RBP18.72■□□□□ 0.59
PMS1-206ENST00000418224 GALCP54803 685 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 PABPC4Q13310 644 aaKnown RBP eCLIP18.72■□□□□ 0.59
PMS1-206ENST00000418224 LLGL1Q15334 1064 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 MFSD14BQ5SR56 506 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 RNF43Q68DV7 783 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 VPS36Q86VN1 386 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 RBM46Q8TBY0 533 aaKnown RBP18.72■□□□□ 0.59
PMS1-206ENST00000418224 LRRC37BQ96QE4 947 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 TMEM165Q9HC07 324 aa18.72■□□□□ 0.59
PMS1-206ENST00000418224 USP17L10C9JJH3 530 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 PON1P27169 355 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 HOXA7P31268 230 aaPredicted RBP18.71■□□□□ 0.59
PMS1-206ENST00000418224 MARSP56192 900 aaKnown RBP18.71■□□□□ 0.59
PMS1-206ENST00000418224 KHDC1Q4VXA5 237 aaKnown RBP18.71■□□□□ 0.59
PMS1-206ENST00000418224 SNX30Q5VWJ9 437 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 SCG3Q8WXD2 468 aaKnown RBP18.71■□□□□ 0.59
PMS1-206ENST00000418224 MED24O75448 989 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 UFL1O94874 794 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 ZCCHC18P0CG32 403 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 SLC35G2Q8TBE7 412 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 DTX3LQ8TDB6 740 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 BZW2Q9Y6E2 419 aaKnown RBP18.71■□□□□ 0.59
PMS1-206ENST00000418224 ANKRD63C9JTQ0 380 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 SKIP12755 728 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 SFR1Q86XK3 245 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 ATL2Q8NHH9 583 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 IFT43Q96FT9 208 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 TRAPPC9Q96Q05 1148 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 CHKBQ9Y259 395 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 LRCH1Q9Y2L9 728 aa18.71■□□□□ 0.59
PMS1-206ENST00000418224 GFPT2O94808 682 aa18.7■□□□□ 0.58
PMS1-206ENST00000418224 ARSHQ5FYA8 562 aa18.7■□□□□ 0.58
PMS1-206ENST00000418224 RFWD3Q6PCD5 774 aa18.7■□□□□ 0.58
PMS1-206ENST00000418224 ENDOVQ8N8Q3 282 aaKnown RBP18.7■□□□□ 0.58
PMS1-206ENST00000418224 PREBQ9HCU5 417 aa18.7■□□□□ 0.58
PMS1-206ENST00000418224 CD209Q9NNX6 404 aa18.7■□□□□ 0.58
PMS1-206ENST00000418224 STOML1Q9UBI4 398 aa18.7■□□□□ 0.58
PMS1-206ENST00000418224 AJAP1Q9UKB5 411 aaPredicted RBP18.7■□□□□ 0.58
PMS1-206ENST00000418224 COL14A1Q05707 1796 aaKnown RBP18.7■□□□□ 0.58
PMS1-206ENST00000418224 DDX3XO00571 662 aaKnown RBP eCLIP18.7■□□□□ 0.587e-11■■■□□ 18.9
PMS1-206ENST00000418224 CLIC2O15247 247 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms