RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 PPP4R3AQ6IN85 833 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 PIK3AP1Q6ZUJ8 805 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 C4orf19Q8IY42 314 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 SLFN12Q8IYM2 578 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 DYDC2Q96IM9 177 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 RTP3Q9BQQ7 232 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 HERC2P3Q9BVR0 1158 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 COLEC11Q9BWP8 271 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 ZSWIM4Q9H7M6 989 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 MINDY3Q9H8M7 445 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 KCNMB3Q9NPA1 279 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 IGSF9Q9P2J2 1179 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 VAV3Q9UKW4 847 aa17.35■□□□□ 0.37
SBDSP1-201ENST00000415772 PROB1E7EW31 1015 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 MLH1P40692 756 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 CYP4A11Q02928 519 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 CTTNQ14247 550 aaKnown RBP17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 FERMT3Q86UX7 667 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 TPH2Q8IWU9 490 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 SIX5Q8N196 739 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 ZNF579Q8NAF0 562 aaKnown RBP17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 CCDC51Q96ER9 411 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 RPS6KC1Q96S38 1066 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 PHF20Q9BVI0 1012 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 VN1R3Q9BXE9 311 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 KCNK12Q9HB15 430 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 RGL1Q9NZL6 768 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 DUSP12Q9UNI6 340 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 IPPQ9Y573 584 aa17.34■□□□□ 0.37
SBDSP1-201ENST00000415772 PRR23AA6NEV1 266 aa17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 ARL5CA6NH57 179 aa17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 INPPL1O15357 1258 aa17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 MYBP10242 640 aa17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 AOC1P19801 751 aa17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 NBL1P41271 181 aa17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 CYP26C1Q6V0L0 522 aa17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 ASCL5Q7RTU5 278 aa17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 SMG7Q92540 1137 aaKnown RBP17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 WASF1Q92558 559 aa17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 CPB2Q96IY4 423 aa17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 GAD1Q99259 594 aa17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 TM6SF1Q9BZW5 370 aa17.33■□□□□ 0.36
SBDSP1-201ENST00000415772 CLUHO75153 1309 aa17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 TEX28O15482 410 aa17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 B4GALT3O60512 393 aa17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 CFHP08603 1231 aa17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 HOXA11P31270 313 aaPredicted RBP17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 SCNN1GP51170 649 aa17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 AFF1P51825 1210 aaKnown RBP17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 TMEM132AQ24JP5 1023 aa17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 UBXN11Q5T124 520 aa17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 FRMD5Q7Z6J6 570 aa17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 CMASQ8NFW8 434 aaPredicted RBP17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 CSRNP2Q9H175 543 aa17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 WRAP73Q9P2S5 460 aaPredicted RBP17.32■□□□□ 0.36
SBDSP1-201ENST00000415772 TSPAN1O60635 241 aa17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 CREMQ03060 361 aa17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 NPY5RQ15761 445 aa17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 PALB2Q86YC2 1186 aa17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 GLYCTKQ8IVS8 523 aa17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 COLGALT2Q8IYK4 626 aa17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 SMG8Q8ND04 991 aaKnown RBP17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 KCNG4Q8TDN1 519 aa17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 EIF2AQ9BY44 585 aaKnown RBP17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 WDR6Q9NNW5 1121 aaKnown RBP17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 PARP2Q9UGN5 583 aa17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 PCDHA12Q9UN75 941 aa17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 GIT1Q9Y2X7 761 aa17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 HES2Q9Y543 173 aa17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 DENND4AQ7Z401 1863 aa17.31■□□□□ 0.36
SBDSP1-201ENST00000415772 STK36Q9NRP7 1315 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 LILRB3O75022 631 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 SPATA31D3P0C874 917 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 KRT2P35908 639 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 PTENP60484 403 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 FOXK2Q01167 660 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 ANGPT1Q15389 498 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 USP41Q3LFD5 358 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 CWF19L1Q69YN2 538 aaKnown RBP17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 SPATA31D4Q6ZUB0 917 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 CCDC105Q8IYK2 499 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 DTWD2Q8NBA8 298 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 HDAC7Q8WUI4 952 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 PLEKHA4Q9H4M7 779 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 MARCH5Q9NX47 278 aa17.3■□□□□ 0.36
SBDSP1-201ENST00000415772 TADA2AO75478 443 aa17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 DGAT1O75907 488 aa17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 DSG1Q02413 1049 aa17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 SCRN1Q12765 414 aa17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 CALCRLQ16602 461 aa17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 GET4Q7L5D6 327 aaPredicted RBP17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 TAS1R1Q7RTX1 841 aa17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 HAS1Q92839 578 aa17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 NXPE3Q969Y0 559 aa17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 ZFP42Q96MM3 310 aa17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 EIF2AK1Q9BQI3 630 aaKnown RBP17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 RNF39Q9H2S5 420 aa17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 ORC3Q9UBD5 711 aaPredicted RBP17.29■□□□□ 0.36
SBDSP1-201ENST00000415772 WNT16Q9UBV4 365 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms