RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 IL1RL1Q01638 556 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 UBE3AQ05086 875 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 CYP4F3Q08477 520 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 ACVR2BQ13705 512 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 AUHQ13825 339 aaKnown RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 EIF4A2Q14240 407 aaKnown RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 UBE3CQ15386 1083 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 FSCN1Q16658 493 aaKnown RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 CCDC157Q569K6 752 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 SAMD5Q5TGI4 173 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 CCBE1Q6UXH8 406 aaPredicted RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 CHD1LQ86WJ1 897 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 SIRT2Q8IXJ6 389 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 PPIL6Q8IXY8 311 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 SPC24Q8NBT2 197 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 BAHD1Q8TBE0 780 aaPredicted RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 STT3BQ8TCJ2 826 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 ZNF606Q8WXB4 792 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 ZNF516Q92618 1163 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 ELF4Q99607 663 aaPredicted RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 ZMAT3Q9HA38 289 aaKnown RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 USP36Q9P275 1121 aaKnown RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 SRP68Q9UHB9 627 aaKnown RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 MOSPD1Q9UJG1 213 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 SOX13Q9UN79 622 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 GPR55Q9Y2T6 319 aaPredicted RBP6.48□□□□□ -1.37
CBX1P3-201ENST00000413296 CLASP1Q7Z460 1538 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 CCDC154A6NI56 674 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 AQP12BA6NM10 295 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 TTLL8A6PVC2 850 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 FAM25EA8MYX2 175 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 NT5C1B-RDH14C9J2C7 533 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 HNRNPDLO14979 420 aaKnown RBP6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 SHOXO15266 292 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 PHGDHO43175 533 aaKnown RBP6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 MTSS1O43312 755 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 ST18O60284 1047 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 SCGB1D1O95968 90 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 ACADMP11310 421 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 PAMP19021 973 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 STAT5AP42229 794 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 AFMP43652 599 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 USP11P51784 963 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 SLC5A3P53794 718 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 FOXO4P98177 505 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 POU4F2Q12837 409 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 LRMPQ12912 555 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 SNAPC2Q13487 334 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 TMEM266Q2M3C6 531 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 ANKDD1AQ495B1 522 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 VWA3BQ502W6 1294 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 PAN2Q504Q3 1202 aaKnown RBP6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 NOL9Q5SY16 702 aaKnown RBP6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 ZNF697Q5TEC3 545 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 LHX8Q68G74 356 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 SULT6B1Q6IMI4 303 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 CNKSR3Q6P9H4 555 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 KDELC1Q6UW63 502 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 TMTC3Q6ZXV5 915 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 DHX32Q7L7V1 743 aaKnown RBP6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 NUP54Q7Z3B4 507 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 KCNK18Q7Z418 384 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 TBC1D21Q8IYX1 336 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 TMCO5AQ8N6Q1 288 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 MOSPD2Q8NHP6 518 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 PANK1Q8TE04 598 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 GIMAP1Q8WWP7 306 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 ANKS1AQ92625 1134 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 FBXW5Q969U6 566 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 ASIC4Q96FT7 647 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 FNBP1Q96RU3 617 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 WNT10AQ9GZT5 417 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 SYNCQ9H7C4 482 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 SAYSD1Q9NPB0 183 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 EIF2B3Q9NR50 452 aaKnown RBP6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 GPR27Q9NS67 375 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 KRT82Q9NSB4 513 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 TJP2Q9UDY2 1190 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 PCOLCE2Q9UKZ9 415 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 CNPY2Q9Y2B0 182 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 TMEM5Q9Y2B1 443 aa6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 EPN1Q9Y6I3 576 aaPredicted RBP6.47□□□□□ -1.37
CBX1P3-201ENST00000413296 A0A1B0GTH6 734 aa6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 J3QW42 95 aa6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 GTPBP1O00178 669 aaKnown RBP6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 MUSKO15146 869 aa6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 USP2O75604 605 aaPredicted RBP6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 ERAL1O75616 437 aaKnown RBP6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 SLC22A3O75751 556 aa6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 SMNDC1O75940 238 aaKnown RBP eCLIP6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 ENDOD1O94919 500 aa6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 SLU7O95391 586 aaKnown RBP6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 NR2F1P10589 423 aa6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 MTHFD2P13995 350 aa6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 NNMTP40261 264 aa6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 CCR5P51681 352 aa6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 CCR9P51686 369 aa6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 NLRP5P59047 1200 aa6.46□□□□□ -1.38
CBX1P3-201ENST00000413296 RBP5P82980 135 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms