RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 COG5Q9UP83 839 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 ATP2A1O14983 1001 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 SBF1O95248 1867 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 CALCAP01258 141 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 ANXA13P27216 316 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 USP8P40818 1118 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 NOL9Q5SY16 702 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 ABHD15Q6UXT9 468 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 DAAM2Q86T65 1068 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 SUGP1Q8IWZ8 645 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 GPC2Q8N158 579 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 USP38Q8NB14 1042 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 SLC35G2Q8TBE7 412 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 PDLIM7Q9NR12 457 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 STXBP5LQ9Y2K9 1186 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 A0A0G2JMZ2 1700 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 NCANO14594 1321 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 SPATA31C2B4DYI2 1134 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 SYF2O95926 243 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 WNT7BP56706 349 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 SND1Q7KZF4 910 aaKnown RBP eCLIP16.42■□□□□ 0.221e-7■■□□□ 11.5
SCAMP4-202ENST00000409472 SLFN11Q7Z7L1 901 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 NT5DC3Q86UY8 548 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 PACS2Q86VP3 889 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 KLHL7Q8IXQ5 586 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 TMEM174Q8WUU8 243 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 ATP6V0A1Q93050 837 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 TIPINQ9BVW5 301 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 AP1M1Q9BXS5 423 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 CYP26B1Q9NR63 512 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 ADAM21Q9UKJ8 722 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 PNMA2Q9UL42 364 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 AGPSO00116 658 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 SGPL1O95470 568 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 PSAPP07602 524 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 LMNB1P20700 586 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 SEPT14Q6ZU15 432 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 TSEN2Q8NCE0 465 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 RDM1Q8NG50 284 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 TAS1R2Q8TE23 839 aa16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 POLR3FQ9H1D9 316 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-202ENST00000409472 ATMINO43313 823 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 KIF1CO43896 1103 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 CEP104O60308 925 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 EIF3JO75822 258 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 HEXIM1O94992 359 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 MCM3P25205 808 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 CARSP49589 748 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 MAP9Q49MG5 647 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 SWT1Q5T5J6 900 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 DCAF12L1Q5VU92 463 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 LMBRD2Q68DH5 695 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 MOB2Q70IA6 237 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 PEX26Q7Z412 305 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 NOP9Q86U38 636 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 PARD3BQ8TEW8 1205 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 DHX38Q92620 1227 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 TMEM143Q96AN5 459 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 PCDHB18PQ96TA0 734 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 AGPAT1Q99943 283 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 A0A0A6YYK5 440 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 HNRNPDLO14979 420 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 RAD51CO43502 376 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 FAM153BP0C7A2 387 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 ITGA4P13612 1032 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 TNFAIP3P21580 790 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 SMTNP53814 917 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 FAM153CQ494X1 144 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 CCDC70Q6NSX1 233 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 PPM1KQ8N3J5 372 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 MSL3Q8N5Y2 521 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 RFFLQ8WZ73 363 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 POMGNT1Q8WZA1 660 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 TAF4BQ92750 862 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 FAM153AQ9UHL3 310 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 TMEM59LQ9UK28 342 aa16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 NOC2LQ9Y3T9 749 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-202ENST00000409472 ATP8B3O60423 1300 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 NFASCO94856 1347 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 SYNGAP1Q96PV0 1343 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 EDN1P05305 212 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 TMEM253P0C7T8 217 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 SUPT20HL2P0C7V6 817 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 DLATP10515 647 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 CHRNB2P17787 502 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 GGCXP38435 758 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 GUCY2DQ02846 1103 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 SUPT20HL1Q3ZLR7 823 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 SLC47A2Q86VL8 602 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 RPUSD2Q8IZ73 545 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 ANKRD35Q8N283 1001 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 EPS8L1Q8TE68 723 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 KIFAP3Q92845 792 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 PI4K2AQ9BTU6 479 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 INTUQ9ULD6 942 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 LRRC37A2A6NM11 1700 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 MAFGO15525 162 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 CYP26A1O43174 497 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 RPS6KA5O75582 802 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 OTUD6AQ7L8S5 288 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms